LOCUS LJ615342 1972 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c66079.graph_c1_seq1.
ACCESSION LJ615342
VERSION LJ615342.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1972)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1972
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c66079.graph_c1_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 612 a 400 c 328 g 632 t
ORIGIN
1 tttttttttt ttttttcatt taacaaaatc acatttatta ttaaatatac aactcgtata
61 atatcagccg atgcgactat aatcgttatc acagcatttt gcaggtagac attcgtaatg
121 tcagtctctt aaccaaataa cttaacaaaa cttactaatt atcgtagtaa ataaatgcaa
181 ttggtgactt tcgtgctttc ggatgcaact aactaacttt ttaatgttca tgtaggttta
241 cacaagaata tatttttaaa taaaaacatt tgttaaatcc cacgacactt taaatgaaac
301 catattccaa actgttagca taccacatct aacaggacat ggttatgaag ctgcacaata
361 tcgttattgt taactaattc tacttcatta ttttacttat catttcttta acgttaaagt
421 gtaacgttca tatctaaata gatatgctcc gaagaagaaa tatttcaatg taaatatatt
481 tcaatgcgat ataatttaat aattattctg caaagtttac tttcgtcctt tttccggaca
541 tgataaatta attaaatata aaagtaaaat ataaatacga actgctctta tctctgaaat
601 cttatttaga aaattcaaga tccaaattac atatttaata taatgcaaaa tgttcttagt
661 aatcaaaaag atttattaga agaaaagttg ttacgaatat tatccgttag aaaaagtaat
721 agattgatat cacaattaga gttcaaatat gatctacatg tgtacaccct tttataaaca
781 aaatattatc gaaaggaagt taagatgcta accgaaatgc atgaaatatt tagaacgtaa
841 aatatatcaa aagttttatt tttaattttt aatatttaga gatataactt tgtaaaccca
901 gaaagtttag gagattgtac ctaataacaa atttcataac ttctcgaaat aattaattac
961 gtttttagaa gcgagattaa taatataaca accataaatg gcaagttcta ttcgtcggcg
1021 gacttcgtta atttgtcaag gcaatcatac gactttgatt gtgtgacata tcatgttaat
1081 agctaaatgt taattttaac tgcattgttt gcgtgacaca accgtttatg agttggatct
1141 cttcgggcga catgaagtat caagtttcca ggtttggcgc tcttgaacat ctgtaacgcc
1201 ttggcatgcg ttagtccatc caatgaggaa ccgttgatcg ctaaaatttc gtctcccact
1261 ctcagagtac cttcttccgc agcttgtcca ctggacataa tatcctttac aaagataccc
1321 atgcgtcctt tattgctgtc cacgccgcca acgatggaaa aacccaattt cttcggcgcg
1381 cctttttcca atatgatcgt tagcagatca atagataaac tggatcctcg tcgaacggtg
1441 ggcgcctcgg cgctccgttt tctcacgacc tggaacttct tcatacccgt catcttttga
1501 agtctgatag tcgcgtcgtc aacggcgcaa gggattccag cgttcgtcga agatgacgcg
1561 tcgccggagg aagctgacgg attgattctt ttgttcttcg agatccacgc gtcgggatcg
1621 cttcgcgttc gcgtcaaggc gttgccccac gtgtcgccaa tttcctcacc aaaagtcgga
1681 ttcggttctc tcgcgatctg cagctcgacc gtgccgacgc aactccgcaa agcgtttcgc
1741 gcctccgtca ttgacatgcc gcgtatccta cgtccgcaga ctcggacaac ttcgtcgccg
1801 atgcgatgac taacccttta cgatattaca gtccaaagag atcacgttcc actctagaac
1861 ttgatacgtt agatgtgatg agaaacgcgg cgaagaaaaa catctgcgaa ctctcagttc
1921 ctatcgcttc cgttactaaa tctgttaccg ttgctaataa aatcttaata cg
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