LOCUS LJ602761 1917 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c62661.graph_c0_seq1.
ACCESSION LJ602761
VERSION LJ602761.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1917)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1917
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c62661.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 651 a 350 c 281 g 635 t
ORIGIN
1 cattatctga atcaattaat cttctcaaga gcttccgtta cttcaaagct aatatatttg
61 aaatactata gcgtaggcgg cttcgcgcga cagccaaaaa tgcatgagag cacgatgtgg
121 tttgtgttac ccgacttgct tttccgttca caaagtatgc cgctgtatgt gtgcccgtac
181 ccgcacgttt tacccattca tcatcttttt ttttacgaaa acgattttat tacgcgtcgg
241 agaccgatcc gacaaagtcc caacgtcttg cttttccgtt cgcacgtatt acaattaatc
301 gttacattta ccctaaaacg caatctgtgt atccacgtat ttaaaaaaga atcgaatagc
361 gatcgatata caacgtatac acccatgttt ttttccgttt tcttttttct tcgctagaat
421 agattaggag acaattacag agtgatcttt acggacgaag cgatgaaaat acccatgcga
481 tctcaaatac tgctggtaaa attgtgattt ttcccgttat atcctgtaac tgttggggat
541 aacaaatttt tttgcaaaaa aatcgtaatt cgcttctaat ccgaagaatt ttcgcacgtc
601 aatgactgct aaatttgtca cgaaagattc catttaccgc gaaggaaaca taggtacttt
661 catgctgcaa aatacatttc cacactttga tatactagtt aagagatatt acgaattgta
721 ctaatttttc tttgctacgt gatacagcat aatattaaaa gaggagcgag ttaaaaatta
781 tcgttatatg atatcattgt tctttttact ttttataaaa tagcacaaat tacaagattt
841 ttccagatat tttattatcg gaaaaaaaat tcgccatctc atcttctcac cattctcatc
901 ttatctttgt tccgacggtt ttaaattagg cccagagcag ccggcaattg atttttaata
961 catcacgtca ttcgtttgcc atgtgaaaac atgcttaata cgaaggaata tacaaatacc
1021 aaagagatgc cgcctctttt ctctcaacga gataattaaa actatagcgt aatattacct
1081 actttataca acatttacta cacacatgtc tttgataaac taatctttta cttgtataat
1141 tcagttgttg gaatctcgaa ttaacgtaca aactaaaaac cttcgctctt tcaaatggaa
1201 aatttgttct taatcattgt gccgtgtaac gagatcaatt tactatacta caataagcat
1261 aaaatattta taatatataa ttgtgcataa acttacgtat cttcctgatc gataccgttt
1321 acattggcgt ttagcctgct ttgtgaatca atgcgactat aattacacat tctttatcgc
1381 acattataaa aacttaaaaa atattttatg agatctgcac atatacaatt gatacacaaa
1441 taatttaagt atttttgcat cttaaggaag aattttgaga gaactaaaaa atgatataca
1501 aagcatgtcg tgaattctgt aacacagtat tacagaatac aaatgcatgt gcatattaaa
1561 ttatttaata caaatttcca ttatgtgctc tttaaagcaa agaatgaagc tgtatattaa
1621 ttgcaaaatc ccatcatcat atttacaaca catacataag aaaaattata tctacaatcc
1681 taagatctgg atattaacta ttgctgcaag agataaaatt gaagaataga ttatatacag
1741 caatataaaa aaaggtgtcg cgtcgtcctt atttcaataa aattcacttt cagcgaatca
1801 gtgtatatct gtgtgtaaag tgttgtaaat acagattgca cgtttataat caaaagttgc
1861 aaatgaaata aatccggaga gaaatattta acgcgcatgc aacacatttg caccgga
//