LOCUS LJ591663 2594 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c59061.graph_c0_seq2.
ACCESSION LJ591663
VERSION LJ591663.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2594)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2594
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c59061.graph_c0_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 597 a 500 c 380 g 1117 t
ORIGIN
1 cgttcttgct ctaataataa agtgatttcc tttgtatttt tttctatttt ttcaaattgt
61 ttaatttttt cagaaagctc ttctattcta gaatttgctt tgtctacaat aattttatgt
121 tccatcgctt gatcttcaag taattgttta ctttctttta acgcttcttc atgacagttt
181 aatttctgta aaagtttatt attttctagc tccattcgtg aaatgtcgat ctctctagcg
241 tcattttgtt cttctaatac aagtaacgca ttttgcgctt cattgatact catagacatt
301 tcctcaagct gtgttctcaa ctgattgttt aatatagatt taagtttagc atcatcctca
361 agtcttgcaa tttctttccc agttttctgt tttaaacttt caatttttgc ctcaaagaca
421 gattttatcg aatcaaattg agataaatta ccagattgat gctgatctac tagatgtcta
481 tgggtatcta actctttcat gaaagaatga acttgttcgt gcactatttg tgagttatta
541 cgcatcgcat taagcaattc cttatgttcg cgtatgttat cttcaccgcg tttaacttca
601 tattgtaatc tttccacttc agcgttgctt tgagccaacc gattagtaag cgcagcaacg
661 gatgcttgat tttcagccat tattaactca aatcttttct ttctagcaac catttcggcc
721 gcttctgttc taatgtgatc ttttaaagat ctcaattctt gttttttgtc tgccaattcg
781 ctttctgctt tatccaattc agcttgcaaa ctttgactaa aacttgcctg tgtttccacg
841 gatgatctta actcctcaag tgtcgtggaa agtttagtga tttcatcatc tctttgcgaa
901 agtttttcat ctaatgcagc acgttctact tccatacgaa gcaaacatgc tttgtatcta
961 tcatcagcaa gtcgcatctc ttcttctaca gtatttcgcg cctcttcgac catagcattg
1021 acgtgtaatc tgcttacttt agcgtcgcat tcatcaatcg tttttttcac ctgttccttg
1081 ccctcagtgt gacatgctat tagtgcatct cgtttatcag cctcagcttc ttcgataatt
1141 ttctgagcat gtttcattat ccgttcagtt tcctcttcaa gttttttagc ggaagtttgt
1201 tttaattcct ctatttcttc atttttcatc ttcttaacat tttccagttc ttttatatat
1261 tcatctgcgg catcttctaa taatttctcc aatcttaatg tgttttcagt atgttttttt
1321 ttcatgtcat tcaggtcctt tttatatttt tctatcataa tggtatgcct ctcatttgaa
1381 agctttagtt cattttgagc ttcttgcaaa cgttgagtta cgtctttatg aatattttga
1441 agatgcttca attcttccac aagagaacag tttgtttgtt ccattttatt tgccttggtt
1501 tccattttta atgcatgtgt cttataagct tcattttgta ctaaaaattc ttgtttttct
1561 ttttcaaaat cattttttaa acatttaatt tcttcctcgt gtttattagt gaaatcggaa
1621 atcttattag cgtaattgtt atcaagctct tcacattgtg ttttaagttt atgtgattcg
1681 tattgcagag tatataactg attttcaagt tttgaaattt catcctgctt tatttccaaa
1741 gcagatttaa gaatagattg atcttcagtt aaattagtaa tacagacatc aagttgatat
1801 ttttcttttt gtaatgctag tatttcaata tcgcgatttt gtttcattgt ttccaatttg
1861 tttgacaatt ctctaatatg atcttcaaga acttcaacct ctgctctggt ctcctctttc
1921 ttagcatgca attcagcttc caatgttgcc attccttttg atagttcgtt cacacgattt
1981 ctaagttcca tttccattat ttttcgcgtt gaaatttctt gttctttttc cttggtcatt
2041 tctaataatt gcaaacgaag cctctgcatt tctgtctgat atttatcatt atcattattt
2101 agtacatctt gatgcaactt agccattgtt tctatatctt tctggtgttg cgtttctatt
2161 tcattttgtt tcttgcgcaa ttcctctatt tcgatttcta atttccgtat ctcgtctttc
2221 atatcttcga tatgcttctc atgttcctgt atagttttat ctttgtttaa acattctact
2281 tgaagatctg ctagttcttg attggattca tattgtatgc tttgaatttt tattaagggt
2341 tgctgagttt tcaatttagg ataaattgac cctgtcgttg attttgtgac tcgcttcgat
2401 ggcggttggg gcatacggaa aatgggagtc attgtattgc tctttgttga cgcgatcgag
2461 cattctgcgc tacttgtact cttactatct aaaaatctat cagacttctc aataacaagt
2521 cctttcactt tagtgtcgaa ttttggatca tatgcgcctg gtggtggtgc atcgcttcca
2581 agttcgttga accg
//