LOCUS LJ577036 1305 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c51316.graph_c0_seq1.
ACCESSION LJ577036
VERSION LJ577036.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1305)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1305
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c51316.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 471 a 187 c 198 g 449 t
ORIGIN
1 ggagttgcga tcacattgta cgatctgtat ccacatcact ctgttctcca agagaaacga
61 aaatttggca aaatgaaatt agttattttc gctgtattcg ttatgattgc tatggcttta
121 acccaagcac aagagaaacc gtgcagtcct ctgtataaac tttgctacac acatagtgat
181 tgctgtcgtt ttacacaatg tgcgacctat caagccaaat gcgtgccaac atacccgggt
241 gtatttgtac ctggacaaga taaaagaccc cttggtcctg gaccatatcc accaaatgtg
301 ccaaaggaac ttttggtaga ataactgctt agaacttctt tatatgtgac tcagaataca
361 tttaatatct ctttcgaacc atggctagtt tttttctttt aagtatatgt aaaaaagaac
421 agagtttctg ttacaactaa atttaataaa ggcattcaaa tgtaaaaaaa aatcaaatat
481 gcaatatgca atactcctga ttcctataac gttctgaaat aattacatat taagaaaatt
541 tagttaacat atattgaatt tctattaaga aggtaaattt tctaaaaaat ttaaatgtgt
601 gtccaaaata aaatgaataa tacgatatta tataatcatt catatagaat tgctttatat
661 ctgttttaaa tctacattgt catgtcttta gttttggaga gaataattaa ctgtctttaa
721 tatttaatga gtatatttgg aagacatttt agtataattg cacgttgaat gaaatcagaa
781 ataaataaaa gaaaacaaaa atgcctatgg aattactatg tgcatacgaa aactgtactt
841 acacacagtc attaattctt cgataatggt taaaacgaat tagacgaccg cgcccattat
901 tatttggagg gattatcgta aatatatctg cgggcataat cggatgtgct tgaaatttaa
961 tatctattat tacatgctat agtttctact gcgtacggta tgtttagttg ttttagatgc
1021 ataattaaat atacatcaat taaacaacga gataatgcgt atgtaaaaag atcgacgtat
1081 tattattagt gttttatcag atgtataatt aaaattagat aatagatgtt aggtagcaaa
1141 tacaactttt ttctcatgga atgtatgtac atgaattaac atattaacaa atttaaaatc
1201 atactgataa ttaaactaaa ctagaaatta gttttagatt gaaattgcct tgactgcttt
1261 ttatttctgt agacaacgta ataaatgtta ttatcagata tatat
//