LOCUS LI540989 5596 bp mRNA linear TSA 12-MAR-2016
DEFINITION TSA: Lasius neglectus mRNA, contig: c33731.graph_c0_seq30.
ACCESSION LI540989
VERSION LI540989.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042123, DRR042124, DRR042125, DRR042126,
DRR042127, DRR042128
BioSample:SAMD00035781, SAMD00035782, SAMD00035783, SAMD00035784,
SAMD00035785, SAMD00035786
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Lasius neglectus
ORGANISM Lasius neglectus
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Formicinae; Lasius; Lasius.
REFERENCE 1 (bases 1 to 5596)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5596
/db_xref="taxon:111072"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c33731.graph_c0_seq30"
/organism="Lasius neglectus"
/tissue_type="whole body"
BASE COUNT 1924 a 805 c 886 g 1981 t
ORIGIN
1 atacaactga taatgcgacg gcagctaatc attgtagtat agctatgaag actaaaaatt
61 gggtccaatt tgaagatgaa acgggtccaa aagaaactac agatgtggaa aaaaaagccg
121 atagtagcgc acctgttgta ataaagccag agtcggttac agtgcaaatc gacaagatta
181 ataaaagtat tgatccacct gatattaatg ataagaaaag taatgagtat agaggtgctg
241 tgatagcaac cgaatccgtc cagattaatt tagatagatc aggtttaaat cgttccatca
301 catccgatat tccggatctt aaatcaccgt ctgactccgt tagaacggag gccaagagcg
361 cttctttaaa aactattgat ttaagagatg tgtctaatgg tagaaataca tcaaacaatg
421 ttgtcagcac atctattgga aacattagac agggctttgc caatggtgat actatcgtta
481 ctcttttacc agtaaatact aaatggccat ggattactcc ggctaagttt agaccagaat
541 tagtgccaga ggaattgatg gcacaaggat taacgctcac agtggaagat tatgttcaca
601 taatggaatt acttgtgaac gatgtgcgct tcaatatgta taacatatgc tacaagagga
661 ttctggtcct ctggatattc accgcctttg ttgtactgct tggtctgttg ttctctggtg
721 taaccggtct tactttattc gggcttggta tcatgtggct ggtcctgaat gcagctgcaa
781 tattcttttg catgtttatc aagataaaac tcaatcacaa tctggagaaa tgtatggctc
841 aaatcaacaa acatttatta aaacacaaaa taatattggg attagatgat agaggaaaga
901 tctcctgcca caaagtcaac ttgtgtttca tatactttga tactaccgat tgcgttaaaa
961 agctacaaga agtaatagag cgagaagaac gtgaaggtag agtaattggt ggtggtggtg
1021 gtgatgacgc aagcgaatta agtcgacaac gagaattaca acagcgtatg gacattgatg
1081 acagtgacat tgttatacaa ggcagcacta ctacgagaat ctctcgtaaa cagggtaaaa
1141 acgaacaagt attctgccgt tatgtgcaac gttgggcgaa ggattactta cgacgacgtt
1201 tggattggac agttgacgag gagggtggaa atccttcttc gccacgtcac ttagcgtccg
1261 ctctgtgtcc atgtcaatat atagaggaat ggttacgtaa taaaccacgc gttcagggca
1321 gagatttttg tcccagatgg agtagctttc taagagacag aggcatttga atacagttat
1381 tctatactgt ttatatattg ttaatgaact acacatatat atgtgcagtt tcgcatatac
1441 acaaaaatta cagaggtttt ttagagagtt attatttaac tctcttgaat gcgcattgct
1501 atataagcat tttaatattt tgatcaagta tatgatcttt tatacatata caccattact
1561 tatattctta acagtactta ttttattctc gttatggcaa cgtcacgaag aatctcttgt
1621 ttctaacttt attattgcaa tataaagata aagaatcaaa cgaagagttc tgaggaatat
1681 gattcagaat gtaagaaact attacgagca gctttcaaag aaaattgcta tttactttta
1741 tatacacatt gagttgcaaa taacttgaag tattaatatt tttggtttat aaaaccagct
1801 ttatacatat tgaatattca tagaatgtgg ccatttttat tgatatagac atatctataa
1861 atcgcacaat atatagatga caatacaagt tttagcttaa gacaaacatt tattacatgt
1921 taaataagtt gtaaaagaac ttttttatgc cttttaaatt tcttaaagct agtttttaat
1981 atcattgtga acattttgac acaattttgt cttgattatt gtttcttatc attatgtttg
2041 ttatattatt ttagaaatta tgtttataga ttttatctca tttatatatg cgtttaattt
2101 cgagttattt taaatgtact taacaattta gaaatattag catgtacgaa taatcgatgc
2161 atgacaagtg ataatcttac taaaaaattg aaattagtat gattttgctg acttcaatta
2221 tctatgctgt agatcctgta taaatgtgta ctttatatca attattactt tttcatgatc
2281 gcgcgaataa atatggatat aactttttta catgtctaca gcattgaaat atgaactcac
2341 aaaaaattat aattttgatt tttgatcatc aatagagctt atagatcgtt ttttcgttca
2401 aggctcatcc acattccata tttaatgctg aatgtaattt tattcgtgta atataaaatt
2461 acatgtttaa gtgtattata ttctaaggat atatcgacat ttagcattaa atttgaatac
2521 agatctgtgt tttaacaaaa tccatagaga tagatgcata aatgaatatg ataatcttta
2581 ttttagatta tcttgatcat tcctatttta gcattccagt aaattgtttc tgttaaaagg
2641 ctgatagtat ttatcaaaat ttttggagtt tatgtttatg tagttttttc atttatgctg
2701 ataaacgcct ccctttctat caatgatttt tcgatgctct atagttatat ttagcgcgcg
2761 tttatatata tatatttctt gatcatagat atatttttat aggattatac atatatgtaa
2821 aaggcaaacc tgtaaaatgg tgaacatatt tttaattacg aaataacgag cttctcatac
2881 atttcatata acaacaagaa aatactttat aatgttgtta taaaacataa tggcagtcag
2941 agcattatga cagtgattca caaactctac tctctgttta aagaatataa attataacaa
3001 atattagaga gaggaagaat ttgcagcaca cagttccata tgtaataaaa atatataaca
3061 aattaaactc ttgtaagctt gtgtttctct ttgcatattt atagccatca ggaaatgcga
3121 tatccactta gtaccatttg tatactgcat ctacttgagt agatttaatc atacacgtta
3181 tttgtaaaaa aaagtcactt agaaaagaaa aaaaatagat tactattccg cgtcagatct
3241 ggctatcact gaatgatgat ggtgtgtgtg tgtgtgttga caggaacggg cggagttgct
3301 gttgctgagg tatgcgtctc gatgggcacg tcactttgtg cgccgcagac ttgatctggt
3361 tatagactcg caggaacgcg atagaggcgt cgtgggtctg tctgttccac cgcgccattg
3421 tgtctccgcc cgttgccctt gtcaattcat tgaggaccat ctgaaacaca agccaagagg
3481 caagttgacg ttacgcaaat tctttctaat gccagacttc actgtcaatt gaatactgcc
3541 aatgtggaga ctgatatgac attcttaaga agatcactta aaaattttat gatagaaatt
3601 ctggaaaaat tataagacat gttttgatac tgcaaacgat ttaatattgt atgttcaagt
3661 tgttatgtgt tatgcaatgg ctcattcaac aatcgtgttt ctgaaattac aatgttataa
3721 acataacgta atgagtgatt acgttatcga tatatttatt gtaatagcta agataaaaaa
3781 attatccatt tatattttag tacttcactt aaaattgtgt tttttggttt ttgtacagta
3841 atagcacagg ataattgcgc taaaaataaa aaaagcagtt aacaatggaa aattcatgca
3901 agtaaacaaa aatttatcat tttaataaat ttttataaat gtaaaaatac ataataatcg
3961 tgctatcaat atttttgtta ataaaatgta tgttttttat tggagtaaaa ttttttgata
4021 atttataata accattgcaa acgcggagac tgtgtattta tcttatttta ttacacattc
4081 catatgttaa ctaacaattt attgaaattt aatgccttta tgcaagcgca tttaacgaaa
4141 agactatata tatataatgt agcacaaaag atactcctct tataatatat ctttcatttg
4201 taatctcatt tatatatagc tttgcttatc tacattgtat ttttttccat aaaaatattt
4261 tacgatatct ataaatatct atatcattct tttttttaga ctccttaaat tagcagttat
4321 attaatttca cgccaaataa tatattaaat tatacatcat atcacatata ttatatcaca
4381 tgtgtctcac catagcttct aaacatactc taaaaagcaa aagaaacttt atttctttct
4441 atcctttttt ccatactgtt caattattaa ctggtcttag gatatgcgat gttgaaacat
4501 ttgggcaaaa cactcactac attatgtcaa ctaagataaa attgttcacc attttaaaag
4561 gtaaaatttg tcttttcacg atttaaagta ttaacagctt aataatatat tactcatcat
4621 tttttatttt aagatacaat ttgcgattgt ttatttgtga ctaatataac ttaattaagg
4681 atattattac taagaatcga gaggttttcc ccctttttta agaaacaaca gtaatagtat
4741 gataaatacg gactagacac tggatgacat tatcgtgttc gatataccgt tcgttttgcg
4801 tctacctcgc ttcttccgag ttaaaagaga cgggcatttt ctatttggcc tttattatta
4861 cttttgtcat aagtatttaa aataaggcat tataattctt tcaaaactat agtcaaattt
4921 actgaaaaca aagtatatac gcacatacat attatagatc atatattaca gatgaaatat
4981 atatagaatt gcattttggt caagtatata ttgttgatta aaaacgataa atttctttta
5041 caaaaaataa atttaacaat atcgcaaatg ctaatgtttt aaaaaatatt gaaatttttc
5101 tttagactga gcgcattata catatctcct taattttttt tagtgcaatt gtatacatgt
5161 aaaggctgct gattatgata aaattattaa aagataataa tgaacgtaac gggacgattc
5221 ttatattata agctatatta aatatagata tcactataga aatggtgata cattataaac
5281 atcacactat cgattttaaa atgtaatagt cttatacgca agacatttca aatttacata
5341 tctgttatgt ccgtcctaaa atttgtatag atataagctg tgtgtatgta gtttagatgt
5401 aatatatttt tatataatat ttacagagaa catacttatt acagaaatca ctttataaat
5461 tgtgtaattg tgtgtgtgta cagaactatc gatttttata tacaaactgt aaagcacttt
5521 tatatgattg ttaaagatgt tgtgaaataa agatatatac atatgtctat ttctttacaa
5581 aaaaaaaaaa aaaaaa
//