LOCUS LI523688 3162 bp mRNA linear TSA 12-MAR-2016
DEFINITION TSA: Lasius neglectus mRNA, contig: c32945.graph_c0_seq8.
ACCESSION LI523688
VERSION LI523688.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042123, DRR042124, DRR042125, DRR042126,
DRR042127, DRR042128
BioSample:SAMD00035781, SAMD00035782, SAMD00035783, SAMD00035784,
SAMD00035785, SAMD00035786
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Lasius neglectus
ORGANISM Lasius neglectus
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Formicinae; Lasius; Lasius.
REFERENCE 1 (bases 1 to 3162)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3162
/db_xref="taxon:111072"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c32945.graph_c0_seq8"
/organism="Lasius neglectus"
/tissue_type="whole body"
BASE COUNT 1013 a 762 c 612 g 775 t
ORIGIN
1 ggatatgttc taaggtctat gctcaagtgc acgaaacgga gtccatcaga gttattatcc
61 tacagtttcg tgtgtgttta tgatccaatt cttttcataa tttgtgaagc agctgtcaaa
121 aaattcgtgt gaattatcgg ctatagtgaa gtacacatcc tgtcatagcc atctcttgaa
181 atctcatttg ctctgaagtc gaagattgct tgttcgagca agcttcgtaa tacaagatgg
241 cattgccacc gaattacaaa caagtcgcaa tggctgcgtc aaatatcgta gcctccaatc
301 aacgtataag agcatccggt gggagttcaa gtagttcaac aaacagtaaa gatgctcaga
361 gtccattcgt acagactccg catagccatc caggatttat accacagaaa gttggaaaaa
421 acaccaatgc tgactctcgt atgctgaaac cacctaaacc accagagaaa cctcttatgc
481 catatatgag atatagcagg aaggtatggg atcaagtaaa ggctcagaat cctgagttaa
541 aactatggga aataggcaaa attattggac aaatgtggag agatttgcca gaagaagata
601 aaactgaatt tatcgaggaa tatgaaactg agaaggtgga ttatgaaaaa agcttgaaga
661 tttatcacaa ttcgcctgca tacttaaatt atattgcagc taaaaatcgt ggaaaatctg
721 cactgtgtgc agcacaacaa agtaatgatg atcgagaaag tcacgaacgt tcgtcaggta
781 gcagtaaaag tcaagcggct caggatagga ggattgatat tttaccagca gaagatgatg
841 atgatcaaga tgatggatac tccgtgaaac atgtggcata ttcgcgttac acgagaaacc
901 atcgacttat taatgagatc tttagtgata ctgttgtccc agatgttcgt tcggtagtca
961 ctactcaaag aatgcaagtt ttacgacgtc aagtacaatc tttaacaatg catcagaaaa
1021 aacttgaagc cgaattacaa caaattgaag agaaatttga agcaaagaaa cgtaaattca
1081 tagaaaccag tgaaatattc caagaagaat tgaaaaaggt ataggaaact ttttttaaaa
1141 attagtagta ttgtgtacaa aatattttta ctttcttttt aagcactgta aaccagcagt
1201 agatgaagaa acgtttaaca aaatggtaga acggcaatat gaagctctta gacgggagag
1261 attaaaagga tcagaagaaa atcgttcgga tggaccggcg tctagcgaat ccactccaaa
1321 ttctactccg actccgactc ctgcgtcact taatgatgaa gcccaacctg atgtttctga
1381 caatgattcg atcgagaaga aatccatcag cgttgataaa cctaacattg aaatgaacaa
1441 aaaaatgtcg cctccgtaca tcgaaaataa gaccgaggca ccgccagttc tgcaagcaaa
1501 cactaatcag caacacgctg ggcccaattc tggaatgtac tgcagtaacg tagtcaatcc
1561 gattcaacag catccgcatc agcaacagac gcaaacgtcg cagcatccgc cgccgcaaca
1621 tcaaccatcg ccttctcagc aatcgcatca gcctcctccg ctgacgcagc agcatcaacc
1681 accgccaccg ccgccccagc agcatcagac gctatctgtt ccacaacatc aggcgccgcc
1741 gtcgctgcaa ccgcagccac cgcaacagca gcaaccaccg caatcacagc agcaacaacc
1801 atcagcgccg ccggtactga cgcctcaaca accaaccacg acggccacgg cagcggcggc
1861 tgcggttgca gcggtggtcg cgagcgcaaa cgcgaccgcg aattccactc cgccgaatat
1921 gccgccggtg tccgcatcgg cggtacccat ccagcacaac ccccatcagc aggggatgct
1981 ggcgaatcat tcgatgccac cgcatcaggc gacgcaaggt tctcaggcca cgcaggttct
2041 gccgccgcaa ggaccgaatc cacacactcc gcagatgatg ccgcccaatc aagcttacgg
2101 ccagcaaccg tatcaatccg gacccggtcc tcaacaaccg cagaatgttc ccttagctcc
2161 gaggccgccg catcccactt acagctactc ccagcaacag ccatatcatc aaccttatcc
2221 gcaatacgct catccatatt atcatcaacc atactcgcag tactcgcccc atccgatggg
2281 tcgtccccat agccacggtc ctcatagtcc gcacagtcca cattatcatc ctcaatcacc
2341 tcacacggtt gctgctgaaa gcaacaccaa cactaatgtc accggcggtt ccgcagccgc
2401 cgcggcttcc gcacccgctc ctgataccag taatcctact tcgtactcat cgtccgcagg
2461 acactgtgag agcgaacgtt ccggttcgtc ggaaaatcag gaaggtcaag tagacgctaa
2521 atcgggatcc acttaaatat tgtttatttt acaaacatga ttccgaattt ttattaacat
2581 gtatttgact attcctttct atattcttat gttgcgtcca caaactttca atgtaatcct
2641 tccatttata aaataaaact gtagcgataa tctttagctt tattatagcc tgcaacacat
2701 accacggata cacgaagtac cggtccacgt gaaacgattg tattgcgagg taaaatgaat
2761 aggagaacat tgtacaaaat gctctctgat tatatctttg attcacagga taatcagtct
2821 tatttcactg gtttcatttg ccaaagtcca tcatttaaat aatgacagtt ttcgatgcct
2881 attcccttat ttactttggc actgtaaaaa aaaaatacga caatatataa tatataaata
2941 tctattaaga aaataaatat aaaaaaaaaa aatttatttc aacttacatg tcttctgtcg
3001 ataatgttgt aattccgaca gctaacgcat gttgcttgcc ctctgccata acagcctata
3061 tatcatctaa agttaaggat tcgtatcttg atgtgtaata aatcaattaa aatatataaa
3121 gaaaagatat ctgtatggtt gtgattttat atttgaagga ta
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