LOCUS LC593164 1327 bp DNA linear PLN 07-JAN-2022
DEFINITION Dysphania pumilio HIRO:HIRO-MY-142081 chloroplast rbcL gene for
ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
partial cds.
ACCESSION LC593164
VERSION LC593164.1
KEYWORDS .
SOURCE chloroplast Dysphania pumilio
ORGANISM Dysphania pumilio
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae;
Dysphanieae; Dysphania.
REFERENCE 1 (bases 1 to 1327)
AUTHORS Tsubota,H. and Inoue,Y.
TITLE Direct Submission
JOURNAL Submitted (10-NOV-2020)
Contact:Hiromi Tsubota
Hiroshima University, Graduate School of Integrated Sciences for
Life, Miyajima Natural Botanical Garden; 1156-2 Mitsumaruko-yama,
Miyajima-cho, Hatsukaichi, Hiroshima 739-0543, Japan
URL :https://www.digital-museum.hiroshima-u.ac.jp/~main/
REFERENCE 2
AUTHORS Phan,Q.C., Nakahara-Tsubota,M., Inoue,Y. and Tsubota,H.
TITLE New record of Dysphania pumilio (Amaranthaceae) from Hiroshima
Prefecture, southwest Japan
JOURNAL Hikobia 18, 145-156 (2021)
COMMENT
FEATURES Location/Qualifiers
source 1..1327
/collected_by="Q. C. Phan & M. Nakahara-Tsubota"
/collection_date="2019-09-05"
/db_xref="taxon:434245"
/geo_loc_name="Japan: Hiroshima, Hatsukaichi, Miyajima
Island"
/lat_lon="34.303 N 132.332 E"
/mol_type="genomic DNA"
/organelle="plastid:chloroplast"
/organism="Dysphania pumilio"
/PCR_primers="fwd_name: HrL1, fwd_seq:
atgtcaccacaaacggagactaaagcagg, rev_name: rbcL1346hR,
rev_seq: gcagctaattcaggactcc"
/specimen_voucher="HIRO:HIRO-MY-142081"
/tissue_type="leaf"
CDS <1..>1327
/codon_start=2
/gene="rbcL"
/product="ribulose-1,5-bisphosphate carboxylase/oxygenase
large subunit"
/protein_id="BCP51359.1"
/transl_table=11
/translation="VGFKAGVKDYKLTYYTPEYETLDTDILAAFRVTPQPGVPPEEAG
AAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEENQYICYVAYPLDLFEEGS
VTNMFTSIVGNVFGFKALRALRLEDLRIPVAYIKTFQGPPHGIQVERDKLNKYGRPLL
GCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKA
QAETGEIKGHYLNATAGTCEEMIKRAVFARELGAPIVMHDYLTGGFTANTSLAHYCRD
NGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIHAGTVVGKLEGERDITLG
FVDLLRDDYTEKDRSRGIYFTQSWVSTPGVLPVASGGIHVWHMPALTEIFGDDSVLQF
GGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEIIREACKWS"
BASE COUNT 363 a 252 c 320 g 392 t
ORIGIN
1 tgttggattt aaagctggtg ttaaagatta caaattgact tattatactc ctgagtatga
61 aaccctagat actgatatct tggcagcatt ccgagtaact cctcaacctg gagttccacc
121 tgaagaagca ggggctgcag tagctgctga atcttctact ggtacatgga caactgtatg
181 gaccgatgga cttaccagtc ttgatcgtta caaaggacga tgctaccaca tcgagcccgt
241 tgctggagaa gaaaatcaat atatttgtta tgtagcgtat cctttagacc tttttgaaga
301 aggttctgtt actaacatgt ttacttccat tgtaggtaac gtatttgggt tcaaagccct
361 gcgtgctcta cgtttggagg atttgcgaat ccctgttgct tatataaaaa ctttccaagg
421 cccgcctcac ggtatccaag ttgaaagaga taaattgaac aaatatggtc gtcctctatt
481 gggatgcact attaaaccta aattggggtt atctgctaaa aactacggtc gagcggttta
541 tgaatgtctt cgtggtggac ttgattttac caaagatgat gaaaacgtaa actcccagcc
601 gtttatgcgt tggagagacc gtttcctatt ttgtgccgaa gctatttata aagcacaagc
661 cgaaacaggt gaaatcaaag ggcattactt gaatgctact gcgggtacat gtgaagaaat
721 gataaaaagg gctgtatttg ccagagaatt gggagctcct atcgtaatgc atgactactt
781 aacaggggga ttcactgcaa atactagctt ggctcattat tgccgagata atggtctact
841 tcttcacatc caccgtgcaa tgcacgcagt tattgataga cagaagaatc atggtatgca
901 cttccgtgta ctagctaaag cgttacgtct gtctggtgga gatcatattc atgctggtac
961 cgtagtaggt aagcttgaag gggaaagaga tattacttta ggctttgttg atttactacg
1021 tgatgattat actgaaaaag accgaagtcg cggtatttat ttcactcaat cttgggtttc
1081 cacaccaggt gttctgcctg ttgcttcggg aggtattcac gtttggcata tgcctgctct
1141 aaccgaaatc tttggggatg attctgtact acagtttggt ggaggaactt taggacaccc
1201 ttgggggaat gcaccgggtg ctgtagcgaa tcgagtagct ctagaagcat gtgtacaagc
1261 tcgtaatgag ggacgtgatc ttgctcgcga aggtaatgaa attattcgcg aggcttgcaa
1321 atggagt
//