LOCUS       JO315240                 623 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c51737_c mRNA sequence.
ACCESSION   JO315240
VERSION     JO315240.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 623)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 623)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Nitella hyalina"
                     /mol_type="mRNA"
                     /strain="KGK0190"
                     /db_xref="taxon:181804"
BASE COUNT          128 a          144 c          190 g          161 t
ORIGIN      
        1 aattcccggg agtgggtgcc tgtgtgctgc tgcgggatgt gctgtgtgat ttattgcctg
       61 aggtggtgtg agccagtata gctcccagtt gcatcacctg caagcgagct gagatgacct
      121 gcctggtgtg atgttctgga aggaggtgtg atgccagagc ctgtgaaaac gatctcattg
      181 cctgaatcac atgccaggtg atggtatgag gcggctgatc tggaagtatt gcagggcgcc
      241 catgtgcctg catgatcttg gaatgactaa cacgccccgt tgctgactca gacccaatca
      301 tgagtctgag ctctgctggc gttgaccgct gcctttgaac acttcagagg tgcgcatcgt
      361 tcactgcatg gcattgacta ctgaggcacc ttatgcaatc aaacaactca atcgcgagtg
      421 tcagtctatg cgtgcagtgt gggtgtcatg tggggatcag cttctgcgga gtggcatgga
      481 gacatgtggt ggcggctgca tcagcactgc cacgcgtctt tggtcgttgc ggtgctacag
      541 ccatttgtag agtggttggc gctctggaag cttggaaaca caccttctgt agttgtttat
      601 gcagaacatc acaccagagc aaa
//