LOCUS       JO200695                 773 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Chlorokybus atmophyticus strain UTEX 2591 chatm_c10263_c_s
            mRNA sequence.
ACCESSION   JO200695
VERSION     JO200695.1
DBLINK      BioProject: PRJNA51157
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Chlorokybus atmophyticus
  ORGANISM  Chlorokybus atmophyticus
            Eukaryota; Viridiplantae; Streptophyta; Chlorokybophyceae;
            Chlorokybales; Chlorokybaceae; Chlorokybus.
REFERENCE   1  (bases 1 to 773)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 773)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Chlorokybus atmophyticus"
                     /mol_type="mRNA"
                     /strain="UTEX 2591"
                     /culture_collection="UTEX:2591"
                     /db_xref="taxon:3144"
BASE COUNT          144 a          255 c          238 g          136 t
ORIGIN      
        1 tggagcgcag gccacgctcg acggcctcgt cgcgcacgaa cgcgccaccg cgggaaacaa
       61 gttcctcgaa ggggcgtggc gaggtgctga ggcgtaccat ctatggatgg tggcacatag
      121 acagctgtat gctggtgatg ccgatggcgc cgtggccgcc gccttgcgct tgcgcgaata
      181 cgaagacatc cttgaccccg tttgatgtgc actctttggg tgcgttggca tctctggcag
      241 ccgggcgtta cggccaggcg tcccgggccc tggtcgccct cgagtccctg cccgctccag
      301 cctccaccaa caatccaaca aacactaatg ccaatgtcaa tgccagcaat gaccgtcgtg
      361 aggcgtacgc tgccgtcgcc atggccgtct tcacacgcca tccaccgcag gacccgaagg
      421 gcaaaggtgt ggcgtgtccg agctgccggt ccgcatccgt acaagagtgg cactcgcgtt
      481 gccccaacgc ggcctgcggg gccgcgttcc ccatgtgcgt ggccaccggc cgcaccatca
      541 tccaggaatc ccaggtacgg tgtcgtgcgt gcaagcacca cgttgcgagc agcgaggcgc
      601 gtcggcacgt gcattgccct ctctgccacg ccatgctgga cccgggagac cgtcacagca
      661 gcaccggctc gggacttagc agcagagagt cctcacacca ccgcctgaga tgatagcaag
      721 gagttgtgag tgcccgaaag tgtgagcaag gtaccattgt aacttggccc ttt
//