LOCUS       JO168317                 885 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c12888_c_s
            mRNA sequence.
ACCESSION   JO168317
VERSION     JO168317.1
DBLINK      BioProject: PRJNA51161
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Chaetosphaeridium globosum
  ORGANISM  Chaetosphaeridium globosum
            Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
            Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE   1  (bases 1 to 885)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 885)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Chaetosphaeridium globosum"
                     /mol_type="mRNA"
                     /strain="SAG 26.98"
                     /culture_collection="SAG:26.98"
                     /db_xref="taxon:96477"
BASE COUNT          152 a          274 c          285 g          174 t
ORIGIN      
        1 cgggatccgc aatcagttcc gtgccatgtt tgtcgccaat tgccacgtgt cggagagctc
       61 catcctgcgg aacgagaccg gctcggagat cttcaagccg gtggcatgca accactgcaa
      121 cgtggaggtg ggcgtcatcg acgaggacga ggtctaccac ttcttcaaca cgctcgccgg
      181 cgagcccata tagaggcgac gcgttggcgc gggcgcgacc cccacggtgc cgcttgcgca
      241 cggtccacgc aataacgggg ttacggttgg cgcttcgtgc cccccacccg cactcaccat
      301 gcgaccgccg actgtctccg cggcggagta ttacttgcca aaaattttaa cacaggggcg
      361 caggcgtggg ccgctcacgc agcagcaagt gctgtcgctg cacccggcca cacatcgacg
      421 gagccgccgc tccgtcgcac caactctgcg ctgtgtacgt tcgcatgaat gcagtgcgtc
      481 aaatgccgtc cgctctaagg ccggtctgga cccggccggt tgcccgtcca tatgaactgg
      541 atggcggtga acagcggcac ctggacggcg cagttcgggt cgcggtaggt cttcaccgag
      601 gcgtggaagt tgttgtcgcc gtcgtcgtcg acgctctgca ggtagtagac gatctccttc
      661 acctccgtgg tgaggcggaa ctcctgctgc aggaacagcc gcacgtcgtc cgaggcgcgc
      721 agcagcagcg tgtgcagctg cgtgtcgaag acgtacttag gctgcgagaa cgtctcggtg
      781 agctgcttgt tgagcttctc gatgtgctgc accgcctggt tgtggaagcg gtggcctcgc
      841 cagtactgtg tgatgtggtc agcgacaagc ttcttggggt cgtcg
//