LOCUS JM340795 180 bp DNA linear GSS 11-AUG-2011
DEFINITION IST14604E7HMR1 TIGM C57BL/6N Gene Trap Library Mus musculus
genomic, genomic survey sequence.
ACCESSION JM340795
VERSION JM340795.1
DBLINK BioSample: SAMN00184093
KEYWORDS GSS.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 180)
AUTHORS Hansen,G.M., Markesich,D.C., Burnett,M.B., Zhu,Q., Dionne,K.M.,
Richter,L.J., Finnell,R.H., Sands,A.T., Zambrowicz,B.P. and
Abuin,A.
TITLE Large-Scale Gene Trapping in C57BL/6N Mouse Embryonic Stem Cells
JOURNAL Genome Res. 18 (10), 1670-1679 (2008)
PUBMED 18799693
COMMENT Contact: Michael P. McLeod
Texas A&M Institute for Genomic Medicine (TIGM)
670 Raymond Stotzer Pkwy 4485 TAMU, College Station, TX 77843-4485,
USA
Tel: 979 845 8446
Fax: 979 458 5559
Email: info@tigm.org (www.tigm.org)
Class: Gene Trap.
FEATURES Location/Qualifiers
source 1..180
/organism="Mus musculus"
/mol_type="genomic DNA"
/strain="C57BL/6N"
/db_xref="taxon:10090"
/sex="male"
/cell_line="Lex3.13 ES transgenic cell line harboring
insertion mutation"
/cell_type="embryonic stem cell"
/clone_lib="SAMN00184093 TIGM C57BL/6N Gene Trap Library"
/note="strain origin confirmed on the basis of 110 genetic
markers distributed across 19 autosomes and the X
chromosome (Charles River Laboratories); sequence tags are
derived from genomic sequence by inverse PCR (IPCR) and
represent the gene-trap vector insertion site; sequence
reads represent either the upstream (F) or downstream (R)
vector-genomic junction, amplified from circularized
genomic DNA."
BASE COUNT 44 a 29 c 28 g 76 t
ORIGIN
1 caatatnatt ttgatatcna gaaataaact ttgtgaggct ggcccttttt gttatttgtt
61 tcttcatttt accgatttcn gaataaatta tgacagctgg tctgttgttt taggatttgg
121 taccttaaat ctaaattttc tttcttgtta tgatactaca gatccttccc tgaaatggcc
//