LOCUS HQ214016 2963 bp DNA circular VRL 27-FEB-2014
DEFINITION Beet curly top virus isolate MX-P24, complete genome.
ACCESSION HQ214016
VERSION HQ214016.1
KEYWORDS .
SOURCE Beet curly top virus
ORGANISM Beet curly top virus
Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota;
Repensiviricetes; Geplafuvirales; Geminiviridae; Curtovirus;
Curtovirus betae.
REFERENCE 1 (bases 1 to 2963)
AUTHORS Chen,L.F., Vivoda,E. and Gilbertson,R.L.
TITLE Genetic diversity in curtoviruses: a highly divergent strain of
Beet mild curly top virus associated with an outbreak of curly top
disease in pepper in Mexico
JOURNAL Arch. Virol. 156 (4), 547-555 (2011)
PUBMED 21193937
REFERENCE 2 (bases 1 to 2963)
AUTHORS Chen,L.-F., Vivoda,E. and Gilbertson,R.L.
TITLE Direct Submission
JOURNAL Submitted (01-SEP-2010) Plant Pathology, UC Davis, One Shields Ave,
Davis, CA 95616, USA
FEATURES Location/Qualifiers
source 1..2963
/organism="Beet curly top virus"
/mol_type="genomic DNA"
/isolate="MX-P24"
/host="Capsicum annuum"
/db_xref="taxon:10840"
/geo_loc_name="Mexico"
/collection_date="2007"
gene 290..571
/gene="V3"
/locus_tag="BMCTVgp1"
CDS 290..571
/gene="V3"
/locus_tag="BMCTVgp1"
/codon_start=1
/product="movement protein"
/protein_id="ADN84082.1"
/translation="MMVCLPDWLFLLFIFSILLQSGTNFYGTFQSGSISRQLSSLSSS
IDQLFLKIQQVVYTRNPSRDRGSDPRRRRGLSAIPEGIEEVTETQGQFP"
gene 366..746
/gene="V2"
/locus_tag="BMCTVgp2"
CDS 366..746
/gene="V2"
/locus_tag="BMCTVgp2"
/codon_start=1
/product="ss-ds DNA regulator"
/protein_id="ADN84083.1"
/translation="MGPFRVDQFPDNYPAFLAVSTSCFLRYNKWCILGIHQEIEALTL
EEGEVFLQFQKELKKLLRLKVNFHRKCSLYEEIYKKYVRNVAEKKGESSKCVAKEEEN
YYDYEEIPMEEACVKKQDFEVKDV"
gene 586..1350
/gene="V1"
/locus_tag="BMCTVgp3"
CDS 586..1350
/gene="V1"
/locus_tag="BMCTVgp3"
/codon_start=1
/product="capsid protein"
/protein_id="ADN84084.1"
/translation="MRKYTRNTYAMSQKRKVNLQSAWPKKRRTTTTTRKYQWRRPVLK
NRTLKLKMYDDMLGSGGIGSTISNNGMITMLNNYVQGIGDSQRANNITVTKHLKFDMA
LMGSSAFWETPNYMTQYHWIIIDKDVGSVFPTKLSSIFDIPDNGQAMPSTYRIRRDMN
ERFIVKKKWRTHLMSTGTGYGGKETYKAPSMPNYKKPMNVNVRNLNLRTIWKDTGGGK
YEDVKENALLYVVVNDNTDNTNMYATLFGNCRCYFY"
gene complement(1361..1771)
/gene="C3"
/locus_tag="BMCTVgp4"
CDS complement(1361..1771)
/gene="C3"
/locus_tag="BMCTVgp4"
/codon_start=1
/product="replication enhancer"
/protein_id="ADN84085.1"
/translation="MNVITDFRTGLPITLEQATHSTPTRSVPNPIYFKLLWFHRFGTV
YQLKIQMRFNHNLRKSLNLHKCWIDLTITGSHRTLTGDRFLRVLKTQVDKEIKKRSSL
SINIVISILNHVFYDVFNFVSSVIQYTSIAMNLY"
gene complement(1458..1901)
/gene="C2"
/locus_tag="BMCTVgp5"
CDS complement(1458..1901)
/gene="C2"
/locus_tag="BMCTVgp5"
/codon_start=1
/product="pathogenicity-associated protein"
/protein_id="ADN84086.1"
/translation="MKPLGPGLYKIQSSLKSPVLSLIKIQKRPRKVKLPCKCHFTIHN
ECHHGFSHGTTYYPGTGDTFNTNKIRSESHLLQTTMVPQIRNGIPTQNSDEIQPQPPQ
ISQPSQVLDRFDDNWITQDIDWRPFFESLEDPSGQGNQKTIFSLN"
gene complement(1792..2868)
/gene="C1"
/locus_tag="BMCTVgp6"
CDS complement(1792..2868)
/gene="C1"
/locus_tag="BMCTVgp6"
/codon_start=1
/product="replication-associated protein"
/protein_id="ADN84087.1"
/translation="MPRRPTFQIRAKNVFLTYPRCSIIKEDALEILKNIPCPSDKLFI
RVSQEKHQDGSLHLHALIQFKGKAQFRNPRHFDITHPSCSSTFHPNFQGAKSASDVKQ
YIEKDGDYVDWGTFQIDGRSARGGQQTANDATAEALNAGNAVDALQIIREKLPEKFIF
QYHNLKPNLEAIFLPPPDIYQPPFPQSSFTRVPEIVQEWADSYFGVDAAARPFRYNSL
ILEGDSRTGKTMWARSLGPHNYISGHLDFSLKTYHDDVSYNVIDDVDPSYLKMKHWKH
LIGAQREWQTNLKYGKPRVIKGGIPSIILCNPGDGSSYQDFLDKSENEALRSWTIQNS
IFFKISSPLFDKDTEASSQGQASL"
gene complement(2454..2711)
/gene="C4"
/locus_tag="BMCTVgp7"
CDS complement(2454..2711)
/gene="C4"
/locus_tag="BMCTVgp7"
/codon_start=1
/product="cell cycle regulator"
/protein_id="ADN84088.1"
/translation="MGLCISTPSSNSRVKHNSETLDTSTSLIHPVAPPSTPTSKEQNL
HPMLNNTSRRTVITSTGVLFKSTDDLLEEANRQLMMLLQRH"
BASE COUNT 875 a 502 c 656 g 930 t
ORIGIN
1 accggatggc cccgaaaatt ttggcccccc aattagaatg tgccacgtgt aatagcactg
61 gcacatgaaa cttatcgtgt aagtttcctt cccttacaag ttttgactag ttaaaagttg
121 tggccgacaa aatactttac tttaataaag taaagtatgc tttactttaa taaagtaaaa
181 cgaatctaac ttttccaaaa cttgcacgat acgtttccaa aacttgcacg atacgtttgg
241 aatttttgtt tatttaaata catatacgac tacgtatagg tatttataaa tgatggtctg
301 tttaccagac tggttatttt tgctatttat atttagtatt ctactgcaat caggtaccaa
361 cttttatggg acctttcaga gtggatcaat ttccagacaa ttatccagcc tttctagcag
421 tatcgaccag ttgtttctta agatacaaca agtggtgtat actcggaatc catcaagaga
481 tagaggctct gaccctagaa gaaggcgagg tctttctgca attccagaag gaattgaaga
541 agttactgag actcaaggtc aatttccata ggaagtgttc tctgtatgag gaaatataca
601 agaaatacgt acgcaatgtc gcagaaaaga aaggtgaatc ttcaaagtgc gtggccaaag
661 aagaggagaa ctactacgac tacgaggaaa taccaatgga ggaggcctgt gttaaaaaac
721 aggactttga agttaaagat gtatgatgat atgcttggtt caggtggtat tggatctacc
781 attagtaata atggtatgat tacgatgttg aataattatg ttcaaggcat tggtgatagt
841 cagcgtgcca acaacattac tgtgacgaag catttgaagt ttgatatggc ccttatgggc
901 agttcagcat tctgggagac tcctaattat atgacccaat atcattggat tatcatagac
961 aaggatgttg ggtcagtgtt tcctacaaag ttatctagta tatttgatat accggataat
1021 ggtcaggcta tgccgtcgac gtatcgtatt cgaagagata tgaacgaaag gttcattgtg
1081 aagaaaaaat ggagaactca tttgatgtct actggaactg gttatggagg gaaggagacg
1141 tacaaggctc cttcaatgcc aaattacaag aagccaatga atgttaatgt tcgcaatctt
1201 aacttgagga ccatttggaa agataccggt ggtgggaaat atgaagacgt gaaggagaat
1261 gctttacttt atgttgttgt taatgataat acagacaata cgaatatgta cgccacattg
1321 tttggcaatt gtagatgtta cttctattaa taacattttt ttaatacaaa ttcatagcaa
1381 tacttgtgta ctgaattaca ctactaacga aattgaatac atcatagaat acatggttta
1441 atatacttat tacaatatta attgagagag aagatcgttt tttgatttcc ttgtccactt
1501 gggtcttcaa gactctcaaa aaacggtcgc cagtcaatgt cctgtgtgat ccagttatcg
1561 tcaaatcgat ccagcacttg tgaaggttga gagatttgcg gaggttgtgg ttgaatctca
1621 tctgaatttt gagttggtat accgttccga atctgtggaa ccatagtagt ttgaagtaga
1681 tgggattcgg aacggatctt gttggtgttg aatgtgtcgc ctgttccagg gtaataggta
1741 gtcccgtgcg aaaatccgtg atgacattca ttatgaattg tgaagtgaca cttacaggga
1801 agcttgacct tgcgaggacg cttctgtatc tttatcaaag agaggactgg agattttaaa
1861 gaagattgaa ttttgtatag tccaggacct aagggcttca ttttctgatt tatctaggaa
1921 gtcctggtag gagcttccat ctcctgggtt gcataatata atacttggaa taccaccttt
1981 aatgacacgt ggtttcccat actttaagtt tgtctgccac tctctttgtg cgcctatgag
2041 gtgtttccaa tgcttcatct ttaagtaaga tggatctacg tcatcaatga cgttgtatga
2101 aacatcatcg tgatatgttt ttaaactaaa atctaaatgg cctgatatgt aattatgagg
2161 ccctaatgat ctagcccaca tagttttacc tgttctagaa tcaccctcta agattaaact
2221 attatatcta aaaggtcgcg cagcggcatc aaccccaaaa taagaatcgg cccattcctg
2281 cacaatttct ggaactcgtg tgaaagagga ttgtggaaag ggtggttggt aaatatctgg
2341 tggaggaagg aaaattgctt ctaagttagg tttaaggttg tggtactgaa aaataaattt
2401 ttcagggagt ttttccctta ttatttgcag tgcatcaact gcattacctg catttaatgc
2461 ctctgcagta gcatcattag ctgtctgttg gcctcctcta gcagatcgtc cgtcgatttg
2521 aaaagtaccc cagtcgacgt aatcaccgtc cttctcgatg tattgtttaa catcggatgc
2581 agattttgct ccttggaagt tggggtggaa ggtggagcta caggatggat gagtgatgtc
2641 gaagtgtcta gggtttctga attgtgcttt acccttgaat tggatgaggg cgtggagatg
2701 cagagaccca tcttgatgtt tttcttgtga aactctaata aataatttat cagatgggca
2761 aggaatattt ttcaatattt ccaaagcatc ctcctttata attgaacatc gtgggtaagt
2821 gaggaaaaca tttttggctc gaatttgaaa tgttggtcta cgaggcatat tgactatctc
2881 gtattggggg ctcaagtaaa cttattggaa tggggggctc agggagccct tatataccac
2941 caggggccat ccgcaataat att
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