LOCUS HO630155 582 bp mRNA linear EST 20-JAN-2012
DEFINITION penium_71836_c30929_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO630155
VERSION HO630155.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 582)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..582
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 166 a 128 c 167 g 115 t
ORIGIN
1 gggagtggga cggcgtatgg ctgttgttta gggatgcttc agcagcagca ccaacaggta
61 tgactgggac agcatcatca tcatcatcsa cacyagcctc racaggatgt agagctrcag
121 gtgcagctca cttgctcctg tracaccctt gctgcggcag gaacaaagca gtactagtag
181 cagcagcagc tgcagcagca gcagtagcaa tagcagcagc actagcagca agagcagcag
241 cagcaattgc tgctgcagca gtagtagcat cagcagtagc agcagtagca gcagtagcag
301 catcattggc atcagcagaa agagcagtag cagcagcagc cactggcaga ggagctggag
361 gaggcaggac actagtgcaa ggagcatctg cagctagtga ggcaaaagcc caattgggag
421 acagtcatgc tgcctgtgaa gttgcaggca gtgtcggtga ggtagtacct ccwgttcaag
481 actaagaggt atctgaggaa gttgaaactt cttgtatcat aagaaatatg cacagatatt
541 gtgactaaag gtttttgtgc aaggctctac ttgtattatc ac
//