LOCUS HO605747 575 bp mRNA linear EST 20-JAN-2012
DEFINITION penium_71836_c56223_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO605747
VERSION HO605747.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 575)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..575
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 130 a 157 c 163 g 125 t
ORIGIN
1 aacgatgggt ttcagcacat tctgcgtgtg ctgaacacca atgttgacgg ccgcaacaag
61 atcatgtacg ccctcacctc catcaagggt atccggccgc cgctttgcca acctcgtgtg
121 caagaaggct gacgtcgacc tgaacaagcg ggcgaggtga gctgtcggcg gccgagctcg
181 agaacctgat ggtgatcgtt ggcaaccccc ggcagttcta gatccccgac tggttcctca
241 acagacaaaa ggaccacaag gacggccgct tctctcagat tgtctctaac ggcctggagg
301 ccaagatgcg cgaggacctc gagaggctga agaagatcag gaaccaccgt ggtctgcgtc
361 actactgggg cctgcgtgtg cgtggtcagc acaccaagac caccggccgc cgtggaaaga
421 cggtcggtgt gtcgaagaag cgttaaaatt tacagtcgag ttggactggc ctttttgtcg
481 agatcttcgt ctcataaaag agtgcttttc tctgtactcc tttcctggtg gtttgcgcac
541 aacaacatga agtgggcttt tcacttcatg aaggc
//