LOCUS HO604798 498 bp mRNA linear EST 19-JAN-2012
DEFINITION penium_71836_c40244_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO604798
VERSION HO604798.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 498)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..498
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 84 a 161 c 126 g 127 t
ORIGIN
1 ccgagctcgt acacgttgcg gtccttgctg gacgcaatca cccgcagcca gtcacgcaca
61 ttgtgcttct tcaggtactt cttcgtcaag tacttcaggt accgtttgga gaagtcggcc
121 gacgcctccg cagtgaccaa aaccctcgtc ttctcgcgcg tcaccttcac ggcgtcgccg
181 agaacgcccg tcttgccgtc caccttgatg cggtcctgca gaaacttctc gaagctggcg
241 atctccatga tcttgtcatc taccggcttg gcgcagtcaa tgacaaacgt caccgccttc
301 ttcttgccct tggtggcagt cgtggagctg gacgacttct tcgccggagg agccattttt
361 gtcgttttgt gcctgtcctc tagtttcccc tgttcgactc ttctgcgcct gtgctccaca
421 acctagcccc ttcgactcgt gcttggtgct gtgctgccac gcggcaatgg ttccaacagc
481 gacagggaga agagaaag
//