LOCUS HO492276 1575 bp mRNA linear EST 19-JAN-2012
DEFINITION nitella_74953_c13900_c Nitella hyalina EST library Nitella hyalina
cDNA 5', mRNA sequence.
ACCESSION HO492276
VERSION HO492276.1
DBLINK BioSample: SAMN00169692
KEYWORDS EST.
SOURCE Nitella hyalina
ORGANISM Nitella hyalina
Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
Characeae; Nitella.
REFERENCE 1 (bases 1 to 1575)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..1575
/organism="Nitella hyalina"
/mol_type="mRNA"
/strain="KGK0190"
/db_xref="taxon:181804"
/clone_lib="SAMN00169692 Nitella hyalina EST library"
/dev_stage="all stages"
/note="Culture harvested from various time points during
the day and across the life cycle."
BASE COUNT 391 a 299 c 385 g 473 t
ORIGIN
1 tccgtgcctt tgatcggcaa gatggtgtgg catgggagta cctgcccaag gcacgatcgt
61 ccctgtccgt gccgcaggyg catcaccmga ttcggagaaa cagagttcga gtgagagatt
121 gacagggcaa tgaagtgcaa ygctkaacac gagtttgawa aggaagagtg yggatcggtt
181 ycyggcaagt gaccrccrag cacttgggat cacyacgtgt tgaatgcktc raatcyggtc
241 aaatttcaga ccacagtcma aaatgggccc cgagcctacg accggacttg aaccggaggc
301 ctttccctgg gcttgggttg gtagtacttg gcktgttcaw cggttattgt ccstgakcgt
361 cggcaatttc aaggcagtct ygtacagcaa tggttgaagt atatgsttga agtatagasc
421 aatgcttgac tgataagaaa kacagcgatg cttatatgtt tgtattgcca cgggtgtggt
481 acctgaggca caacagtttt gattggatgc tgaaatgtta ttcttgagtt atcagattta
541 acgatgattc attttttgta tgccttgcgg agaactggtt gaagtagcga tacgatgatt
601 cagagaaact tgtgatttct gagcctggcc tcaagttttt gggagcwtgg aaagctgcaa
661 ggcttgycga tctagaaata tttttttctg aaacgtttgg actcggcgtg taatgtatgg
721 ttctacttct actgcaaaaa aagactcttc ttgctgtgtg ggcaatgggc attcaaataa
781 ccatttctgg caggctggaa tgtttgagtt gtaacagtgg attgatgtct gaaccatttt
841 tcaatcagct tatacaattt aacacttgat atagctgcct gcttaacgta ttgtcaaata
901 gctatgatag ccgaatgacc taagataagg tgctatttgt caaaaggacg tagcctgtca
961 catggtccta tttgttcgat agaaagttgc cttatgtggc aaaatactat ttgttgtagt
1021 ggaggtatgc tatttgttgc agggtgttat ctgtcgcaag tatgctatgt tgttgcaarr
1081 ttctatttgt tgcgaggggc tatttgtcca ttatgcaaat agttctatgc tgttggagtt
1141 ttatcaccat tggcccagat ctttccgcgt tgaccctagt atataggtta cccatgaggg
1201 aacctttctg ctctattaag cagaactagc aatttttccc gatgagacgc aagacagagt
1261 tgcagattgt gtatcatatg cagagagata tgagtacatg atgcttctga ggttgcaagg
1321 catgcggtgc gagatctaag gaagaagaat ccaaaacctg tttcttttcg gtcctttttt
1381 ccttgtttgt aaagcgttct tcttctttct tttcgtttgt tgaaaacctt tggcgttaac
1441 cgagccacgt aggctgaacg gtacaccatt gtacttggaa ttatgagatc ccgagttcga
1501 aacctcacag accatgttga acctatacca caccggacag ttgatccttc cactggaagc
1561 aatcaatgct gttcc
//