LOCUS HO455392 654 bp mRNA linear EST 19-JAN-2012
DEFINITION klebsormidium_60434_c12972_c Klebsormidium flaccidum EST library
Klebsormidium flaccidum cDNA 5', mRNA sequence.
ACCESSION HO455392
VERSION HO455392.1
DBLINK BioSample: SAMN00169691
KEYWORDS EST.
SOURCE Klebsormidium flaccidum
ORGANISM Klebsormidium flaccidum
Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae;
Klebsormidiales; Klebsormidiaceae; Klebsormidium.
REFERENCE 1 (bases 1 to 654)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..654
/organism="Klebsormidium flaccidum"
/mol_type="mRNA"
/strain="UTEX 321"
/db_xref="taxon:3175"
/clone_lib="SAMN00169691 Klebsormidium flaccidum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 152 a 172 c 169 g 161 t
ORIGIN
1 tatgcgttca gcagagatgt gttggacgga tctccgcaaa tatgatcatc tggaccctaa
61 gcgctcactc tgtaataccg ttttctctct tgcccccttg ttttcgttct ctgcttacaa
121 actgcgtgcg caggttggcc gccatcgacc gcgagattgc gcaccgggca gacgccagca
181 gccgggctgc tagccgcgga gggccgcgcg ccccgccgcc gggagtcaga cgaggcagta
241 atggggccac gccggcccag aaccaatgac acaaccccgc tcgggagagc agccgccgtt
301 agtatgacac actacgatgc cggaccaatt tgttaccttt ttaaggtgga tacgcgcaag
361 cacgtactga attccgggag caggaactct acattctttg cattttttag tacacaacat
421 acttgccaga agcctcatgt tttataggag cgagtacttc gcacagattc ctttgagctt
481 tttaaaagaa aggccggagg gctgggttcg gcctctgtct catttaaaac ataatcaaac
541 tatgcgtgaa gtttggcagc tagagagata ttgcacgtac attcgaagta ggtcaccgag
601 tttttgtggg tttggccgga caatccatga atcattctat gataatcgct gact
//