LOCUS HO450080 406 bp mRNA linear EST 19-JAN-2012
DEFINITION klebsormidium_60434_c30334_c Klebsormidium flaccidum EST library
Klebsormidium flaccidum cDNA 5', mRNA sequence.
ACCESSION HO450080
VERSION HO450080.1
DBLINK BioSample: SAMN00169691
KEYWORDS EST.
SOURCE Klebsormidium flaccidum
ORGANISM Klebsormidium flaccidum
Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae;
Klebsormidiales; Klebsormidiaceae; Klebsormidium.
REFERENCE 1 (bases 1 to 406)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..406
/organism="Klebsormidium flaccidum"
/mol_type="mRNA"
/strain="UTEX 321"
/db_xref="taxon:3175"
/clone_lib="SAMN00169691 Klebsormidium flaccidum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 104 a 120 c 88 g 94 t
ORIGIN
1 attgtttccg tatcttctgt tctaaaaacc tccgctttga tacgtgcaaa cgaagtcaaa
61 aacttcctca cataccattt tctgcatcac ctcatgattc caaaaaagat tcgatctcaa
121 cgagctccaa aaatcgattc gcctcgacat gacacggggc acaaaccccc cagacgagct
181 tcggccgaca tttcgcgctt ttggagttgt gtgcgctcag ggcagaaaag aatagcgacg
241 cactctttca tccccgcagg gtagtttctg ctcttgaagg gaggtcgcgc cccctcgatt
301 gccagatact gagcgacgtc ctcgccaatg gaacttccac gcggctgccc ctcgaacatc
361 tgcaaaccac ggccgggtta ggttaagcaa aaaggttgat gcaacc
//