LOCUS HO438377 533 bp mRNA linear EST 19-JAN-2012
DEFINITION klebsormidium_60434_c11669_c Klebsormidium flaccidum EST library
Klebsormidium flaccidum cDNA 5', mRNA sequence.
ACCESSION HO438377
VERSION HO438377.1
DBLINK BioSample: SAMN00169691
KEYWORDS EST.
SOURCE Klebsormidium flaccidum
ORGANISM Klebsormidium flaccidum
Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae;
Klebsormidiales; Klebsormidiaceae; Klebsormidium.
REFERENCE 1 (bases 1 to 533)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..533
/organism="Klebsormidium flaccidum"
/mol_type="mRNA"
/strain="UTEX 321"
/db_xref="taxon:3175"
/clone_lib="SAMN00169691 Klebsormidium flaccidum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 146 a 122 c 148 g 117 t
ORIGIN
1 cggcgtacct gcggacaaaa gaagattcac accaagacgc acaagaacac gaagcacccc
61 atactgctac aaccaattga ccatagacgc ctaaattcgt tatatccata accggaaaca
121 ttgcaggtac gggagtccga cactttgcag cgggacgact tcgcctgcca gacgtgtttg
181 cctgtcgccg agttgagagc gggtttgaga gcgatagcga tgaaagacaa gaaaggtaat
241 gttattccgg acggccgtgc gaagctgttg gtagatgtga gctttttgga tgctagggaa
301 caaacaggag ggggcctgcg catcctagaa acggcctcct tgggaaggaa tggagccgaa
361 ggttcaggtc ggggtctggt agatgtgcca atcgattagg aacgtcattt tatgttgaca
421 tggacttgtc aaagagcttg caccctgtat aaacagtgga agtcacaata caatgacgtc
481 ctgtaccatg tttggtatgc accgttcaat caggcttccc tcgtacggca tag
//