LOCUS HO421003 539 bp mRNA linear EST 19-JAN-2012
DEFINITION chlorokybus_71836.3_c12128_c Chlorokybus atmophyticus EST library
Chlorokybus atmophyticus cDNA 5', mRNA sequence.
ACCESSION HO421003
VERSION HO421003.1
DBLINK BioSample: SAMN00169690
KEYWORDS EST.
SOURCE Chlorokybus atmophyticus
ORGANISM Chlorokybus atmophyticus
Eukaryota; Viridiplantae; Streptophyta; Chlorokybophyceae;
Chlorokybales; Chlorokybaceae; Chlorokybus.
REFERENCE 1 (bases 1 to 539)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..539
/organism="Chlorokybus atmophyticus"
/mol_type="mRNA"
/strain="UTEX 2591"
/db_xref="taxon:3144"
/clone_lib="SAMN00169690 Chlorokybus atmophyticus EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 97 a 176 c 135 g 129 t
ORIGIN
1 gagtgcaaac aataagtaat atgggtcgat gagctgcgct atgctcccta tgagacaaaa
61 ctactgtccc gactcatact cgaagtagta cgcccgctgc tcttgcatcg ccacaatctc
121 tctcagctgg acgttctctt tcttcaagct cacaacttgt ttcaccagca agttcttctc
181 atcatactgc agcttcacct ccgctttcaa cctgctcagc tcctgcgcgt tggccttggc
241 gaaccggtcc atccttgccg cagcatcctg tgtggcggtc agctccgctt gcagccggtc
301 caactgttca tacaacgcag cttcaccgct gttgctatca tggttattgt gatggttggc
361 gtcgccggca tcactgatgc ggccactgag ctctgaggcc acctcgccct cgacctcgtg
421 cagccgcttc tgcaaggcca gcaagctctc gcggtcggcc tgcgccgcct cggggacggc
481 gtcccaagca tccatgcacc cctgtatgcg gaggtggagt gcgcggnggn tcgatagca
//