LOCUS HO374202 789 bp mRNA linear EST 20-JAN-2012
DEFINITION chaetospheridium_74953.1_c10528_c Chaetosphaeridium globosum EST
library Chaetosphaeridium globosum cDNA 5', mRNA sequence.
ACCESSION HO374202
VERSION HO374202.1
DBLINK BioSample: SAMN00169694
KEYWORDS EST.
SOURCE Chaetosphaeridium globosum
ORGANISM Chaetosphaeridium globosum
Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE 1 (bases 1 to 789)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..789
/organism="Chaetosphaeridium globosum"
/mol_type="mRNA"
/strain="SAG 26.98"
/db_xref="taxon:96477"
/clone_lib="SAMN00169694 Chaetosphaeridium globosum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 175 a 155 c 229 g 230 t
ORIGIN
1 cttattggct agggacatgc attagcacgt ttggcacagt gcatgaatca gaatcacgcc
61 gtagtacaaa gagcgaagtc gtcttgcaac cgttgccatt gttagttgtg tgctacgatc
121 tttttcgtct ttcttttttt acttcatgcc gagattgggg gaacccgatg gtgggggggc
181 tgatggattt ggggcagtgg tgggggagga cgtagagcag tcttctagga agcagtcgcc
241 gttaggaagt ggtccgccag ggagcggggc tggttgtgac ctcgtgaagg gttacttagt
301 ctttgtggct gacgcgaggc ttcatgggaa gaaagagcat tgactgggta gtgtggccag
361 tcttgtattg taaaccggga agactaaaga gaaccggtag actagtggtg gtgcgatggt
421 gaacgggtga caatgatagt aggctagcta tgttgtgttg gccggctgaa ccacaagttg
481 gcccaaattg aggttttact tatcagcgtc cctcctcgag ctaggtcccc ttgccacttg
541 tctacaagcc ggttgcggtg ctttgtggtt ggcatttgtt tttatttttt ctttttcttt
601 caaatgcgat gcaacaacac gcagtgggca aatcaatcat gcccccatga agcagataca
661 ctcatcggtt ttccatacaa gctcaagtac atagtcagtt gtctatagat ggctcttgta
721 atgtagactt taggcttagc tcgttgattg gacaagtttg gaatcaccaa tggctccttg
781 taaaggcta
//