LOCUS HO371376 546 bp mRNA linear EST 20-JAN-2012
DEFINITION chaetospheridium_74953.1_c10544_c Chaetosphaeridium globosum EST
library Chaetosphaeridium globosum cDNA 5', mRNA sequence.
ACCESSION HO371376
VERSION HO371376.1
DBLINK BioSample: SAMN00169694
KEYWORDS EST.
SOURCE Chaetosphaeridium globosum
ORGANISM Chaetosphaeridium globosum
Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE 1 (bases 1 to 546)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..546
/organism="Chaetosphaeridium globosum"
/mol_type="mRNA"
/strain="SAG 26.98"
/db_xref="taxon:96477"
/clone_lib="SAMN00169694 Chaetosphaeridium globosum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 117 a 122 c 161 g 143 t
ORIGIN
1 gaatcmsggg mtgctttgcg gcgctgatgg gctcccccac ctgattgttg acggcaaccg
61 tgctcacctg ggcgagtttg tgtaccccgg aattgtgttc ttgtacatca ccggctggat
121 cggctgggtt ggccggagct acctgattgc tgccaggtct gagaagaagc caacagagaa
181 ggagattatc atcgatgtgc cccttgcctc caggttgatg tggactggcg cagtctggcc
241 attgaaggcc gtgagtgagt tcaagaacgg ccagctcttg gcggacgcaa aggacatcac
301 cgtgtctccc cgctagagat ttgttatgct cttttgctgc aaaatgtttt gggggtatat
361 gggggcactg gttttgtagt ggattaacag ctgagctctg taagcgttat actctctgaa
421 tgtcagagac tggggtatcc cagactgtaa tctgcatgta cagggagatg cctatgtgta
481 gaaggactta gaagtgagtc atctaccatt gaactgtcta ctgcagacta gatgcagatg
541 actcca
//