LOCUS HG323297 118 bp RNA linear BCT 10-FEB-2015
DEFINITION TPA: Escherichia coli str. K-12 substr. W3110 SRP RNA for signal
recognition particle RNA.
ACCESSION HG323297
VERSION HG323297.1
DBLINK BioProject:PRJEB4384
KEYWORDS RNAcentral; Third Party Data; TPA; TPA:specialist_db.
SOURCE Escherichia coli str. K-12 substr. W3110
ORGANISM Escherichia coli str. K-12 substr. W3110
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
Enterobacteriaceae; Escherichia.
REFERENCE 1 (bases 1 to 118)
AUTHORS
CONSRTM SRPDB and RNAcentral
JOURNAL Submitted (03-JUL-2013) to the INSDC.
REFERENCE 2
AUTHORS Rosenblad M.A., Larsen N., Samuelsson T., Zwieb C.
TITLE Kinship in the SRP RNA family
JOURNAL RNA Biol 6(5), 508-516(2009).
PUBMED 19838050
REFERENCE 3
AUTHORS Andersen E.S., Rosenblad M.A., Larsen N., Westergaard J.C.,
Burks J., Wower I.K., Wower J., Gorodkin J., Samuelsson T.,
Zwieb C.
TITLE The tmRDB and SRPDB resources
JOURNAL Nucleic Acids Res. 34(Database issue), D163-D168(2006).
PUBMED 16381838
COMMENT Specialist DB : SRPDB (Signal Recognition Particle Database)
URL : http://rnp.uthscsa.edu/rnp/SRPDB/SRPDB.html
PRIMARY TPA_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-118 AP009048.1 475672-475789
FEATURES Location/Qualifiers
source 1..118
/organism="Escherichia coli str. K-12 substr. W3110"
/strain="K12"
/sub_strain="W3110"
/mol_type="transcribed RNA"
/db_xref="taxon:316407"
ncRNA 1..118
/gene="SRP RNA"
/product="signal recognition particle RNA"
/note="alignment group:Small 4.5S Bacteria (SB)"
/note="ECO:0000305"
/note="SO:0000590"
/note="GO:0006617"
/note="GO:0048501"
/ncRNA_class="SRP_RNA"
BASE COUNT 21 a 34 c 39 g 24 t
ORIGIN
1 gggggctctg ttggttctcc cgcaacgcta ctctgtttac caggtcaggt ccggaaggaa
61 gcagccaagg cagatgacgc gtgtgccggg atgtagctgg cagggccccc acccattt
//