LOCUS EF822552 516 bp DNA linear GSS 02-JUL-2007 DEFINITION Mus musculus C57BL/6N IST11461B3HMF1 gene trap embryonic stem cell insertion site sequence tag (IST), genomic survey sequence. ACCESSION EF822552 VERSION EF822552.1 KEYWORDS GSS. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 516) AUTHORS Hansen,G.M., Markesich,D., Zhu,Q., Richter,L.J., Abuin,A., Sands,A., Finnell,R.H. and Zambrowicz,B.P. TITLE Large-Scale Gene Trapping in C57BL/6N Mouse Embryonic Stem Cells JOURNAL Unpublished REFERENCE 2 (bases 1 to 516) AUTHORS Finnell,R.H. and McLeod,M.P. TITLE Direct Submission JOURNAL Submitted (26-JUN-2007) TIGM, 2121 W. Holcombe Blvd, Houston, TX 77030, USA COMMENT Contact: Richard H. Finnell at Texas Institute for Genomic Medicine (TIGM) Phone: 713-677-7429 Fax: 713-677-7790 Email: ncbigss@tigm.org Website: www.tigm.org. FEATURES Location/Qualifiers source 1..516 /organism="Mus musculus" /mol_type="genomic DNA" /strain="C57BL/6N" /db_xref="taxon:10090" /clone="IST11461B3HMF1" /sex="male" /cell_line="Lex3.13 ES transgenic cell line harboring insertion mutation" /cell_type="embryonic stem cell" /transgenic /note="strain origin confirmed on the basis of 110 genetic markers distributed across 19 autosomes and the X chromosome (Charles River Laboratories); sequence tags are derived from genomic sequence by inverse PCR (IPCR) and represent the gene-trap vector insertion site; sequence reads represent either the upstream (F) or downstream (R) vector-genomic junction, amplified from circularized genomic DNA" source 1..30 /organism="Gene trapping vector VICTR76" /mol_type="genomic DNA" /db_xref="taxon:447635" repeat_region <1..30 /rpt_type=long_terminal_repeat BASE COUNT 145 a 97 c 121 g 123 t ORIGIN 1 gattgactac ccgtcagcgg gggtctttca ntgcacannt acacattcag gcaaatgcac 61 taagtagttt aattttacac taatttattt gtgtaggagg cagagtatac aagaagacaa 121 cttaaggaag tctgtttttt ccttccnaca cgtggggcca ggggactgaa tccgtgtcac 181 tgggcttgaa gctagtgctt gacatgctga cacatntnnt aagctctact tttatgaacn 241 atcagcttta nctgggtggt ggcggcactc aggaggcana ngcaggcana tctctggttt 301 taaggttagc ctgacctacn tacagagtga gttccangac agtcanagct gaaacanann 361 ccctgtcang gacaggaaaa aggaanagag ccnngcatgg aagcagatgc ctatantccn 421 agtatgaggg aagctaangc aagattataa cttcnaggtc nagctaggct tcatagtgag 481 actgnnataa ggaaacatta attgcnacag ttaacg //