LOCUS DF973400 425475 bp DNA linear CON 02-DEC-2021
DEFINITION Trifolium subterraneum DNA, scaffold: Tsud_sc00205.00.
ACCESSION DF973400 BCLP01000000
VERSION DF973400.1
DBLINK BioProject:PRJDB2012
Sequence Read Archive:DRR018263, DRR018264, DRR032035, DRR032036,
DRR032037, DRR032038, DRR032039, DRR032040, DRR032041, DRR032042,
DRR032043
BioSample:SAMD00004201
KEYWORDS WGS; IMPROVED_HIGH_QUALITY_DRAFT.
SOURCE Trifolium subterraneum
ORGANISM Trifolium subterraneum
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae;
50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade;
Trifolieae; Trifolium.
REFERENCE 1 (bases 1 to 425475)
AUTHORS Isobe,S.
TITLE Direct Submission
JOURNAL Submitted (09-NOV-2015)
Contact:Sachiko Isobe
Kazusa DNA Research Institute, Dept. of Plant Genome and Genetics;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
REFERENCE 2
AUTHORS Hirakawa,H., Kaur,P., Shirasawa,K., Nichols,P., Nagano,S.,
Appels,R., Erskine,W. and Isobe,S.N.
TITLE Draft genome sequence of subterranean clover, a reference for
genus Trifolium
JOURNAL Sci Rep 6, 30358 (2016)
REMARK Publication Status: Online-Only
DOI:10.1038/srep30358
COMMENT URL:http://clovergarden.jp/
##Genome-Assembly-Data-START##
Assembly Method :: SOAPdenovo v. 2; Newbler v. 2.7; GAM-NGS;
SSPACE
Assembly Name :: TSUd_r1.1
Genome Coverage :: 552.8x
Sequencing Technology :: HiSeq1000; Hiseq2000; Miseq; Roche454
##Genome-Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..425475
/cultivar="Daliak"
/db_xref="taxon:3900"
/mol_type="genomic DNA"
/note="scaffold: Tsud_sc00205.00"
/organism="Trifolium subterraneum"
CDS complement(join(16646..16771,17285..17809))
/codon_start=1
/locus_tag="TSUD_152960"
/note="Tsud_chr3.g37760.1.sm.mk"
/product="hypothetical protein"
/protein_id="GAU29546.1"
/transl_table=1
/translation="MYLGIELVLALCAAPVRTLFGFEIEPQFNEPYLSTSLQDFWGHR
WNLMVTRTLRLIVYDPIRHIIKSNVGSMWGNYIATLATFIVSGLMHEIIYYYLTRAPP
TWEVTWFFVLHGVCTSVEVAVKKIVLRRGLWLHRVISGPLTLAFLAVTGNWLFFPQLE
RNGVVRKAIGEYAIMLWLQIVICIYNYGCSIADVVAFAIASHRNYSVIFNHMETAM"
CDS complement(join(19986..21152,21249..21312,21449..21567,
21673..21744,23161..23235,23332..23442,23670..23711,
24037..24096))
/codon_start=1
/locus_tag="TSUD_152970"
/note="Tsud_chr3.g37770.1.am.mkhc"
/product="hypothetical protein"
/protein_id="GAU29547.1"
/transl_table=1
/translation="MILSDLDKLIGNQVIYLMPKIVDKLHWYVQNGDTIVDFCCGAND
FSRLMKKKLEETGKRCSYKNFDLLPTKIDLLLNDEIVTVSCVVAYIFVKLAENDFNFE
MRDWMTVQKKELPLGSQLIMGLNPPFGLKAALANKFIDKALEFEPKLMILIVPPETQR
LDRKRKPYDLVWEDERFLSGKSFYLPGSVDANDKQMEQWNVKPPPLYLWSRPDWADKH
KLIAQEHGHLRQHDLSRMESFDKDKSSASHTMDDDYVDDTMLDRMLDHDFLKSTNDED
CSFMVGHKEGLSHGNVDRQEYLVTKAENTSWKRKPIDDGREPTVTSHAKRQNINEMHE
GVLDHGISNPLDFEGYQSESDMIISDNEAGDNGYKPLEPHSSVGDDGYRHLEPLSSSR
MEFGEAYDGTQNWPNVADPLPDYGLADLQDHNSRHLGDSTSSLGHRPVLREDDSPIHP
PGVPNPDPTSSSYLSGHGPAYNQMGSTYSVLGSGSELPYMMNIPAMQTSTPAMQRYAP
RLDELNHVRTNSLEPERPIIGRSTTAERSTPKPGSGNVPPSFPGGPSHLYSRQNSSSW
FSD"
assembly_gap 25197..25693
/estimated_length=497
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
CDS complement(join(27936..28431,28518..28610,28705..28952,
29772..29870,29983..30079,30273..30418,30560..>30619))
/codon_start=1
/locus_tag="TSUD_152980"
/note="Tsud_chr3.g37780.1.sm.mkhc"
/product="hypothetical protein"
/protein_id="GAU29548.1"
/transl_table=1
/translation="LLLTVLEDKDRMRIKKIPDEEVKELARPGFIVDDTYDEIDETVA
EEESDEEDELFDSVCSFCDNGGELFCDGKCMRSFHANKEDGEESSCASLGFSRKEVEE
IQNFYCKNCKYNKHQCFACGELGCSDKFAGAEVFKCASATCGFFYHPQCVTKLLHRVV
EDVQPELVRNIASGEPFTCPAHYCCICKEMENKKEHDLHFAVCRRCPKSYHRKCLPRK
IAFEDIEEEGIVPRAWEGLLPNNRILIYCLKHEIDDELGTPIRDHIKFPIVKEKTKPA
TKEVINKNNAKLDDLPVKRPSAKLSKMSGKMSSGKVGFENPEKISGSNIPRKKANEAS
RRYLNENKRSTLKETERSDYEGNQPSLGAQLYSFYQKGPKQISSGNHVDNVSDNTLSV
KRTKKLSSAPPQLDADSERR"
CDS complement(join(<32369..32465,32560..32975))
/codon_start=1
/locus_tag="TSUD_152990"
/note="Tsud_chr3.g37790.1.sm.mkhc"
/product="hypothetical protein"
/protein_id="GAU29549.1"
/transl_table=1
/translation="MASSDDEVDTQPIFVSNYHFVDDKDAPVSFSVLPIQWSESESLE
GKKEKVFLHGNADNGLQKVFIQVKAWRFDLSNVKPEISVLSKDGRWIKLQKPRKSYED
IIRTVLITVYFMHYVKKNPETSAKSVWDSLSKNKDFSYYEVKPSQNDLLNHMALMGEA
ATRDAVLAKSK"
CDS join(35510..35934,36933..37044,37144..37315,37401..37582,
38177..38302)
/codon_start=1
/locus_tag="TSUD_153000"
/note="Tsud_chr3.g37800.1.am.mkhc"
/product="hypothetical protein"
/protein_id="GAU29550.1"
/transl_table=1
/translation="MVITEEEISEAIHSLFTESNPRTRTFTTLNQVVQELQSKLGHDL
THKLDFITSQINLLFASQQQQQHHRQLQQQQQPPPQQPPQQLLSFQNKDHFALHQNPN
SHSVPVVTSVFRNNPINASAADALASQAPPLSPNVVPKESAQSKPKRRGGPGGLNKLC
GVSPELQVIVGQPAMPRTEIVKQLWAYIKKNNLQDPSNKRKIICNDELRVVFETDCTD
MFKMNKLLAKHIIALEPTKKPAPKKQKVEVELGTRSAEPTPSVIISDSLANFFGVTGR
EMLQSEVLRRIWEYIKVNHLEDPVNPMAIMCDAKLQEIFGCESISALGIPEVLGRHHI
FRRS"
assembly_gap 42162..42181
/estimated_length=20
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 51438..52263
/estimated_length=826
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 53104..54036
/estimated_length=933
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 55514..55699
/estimated_length=186
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 58649..60260
/estimated_length=1612
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
CDS complement(join(70048..70335,70864..70947,71057..71119,
71215..71359,71593..71694,71773..71873,72461..72527,
72685..72731,72980..73171,73253..73299,73502..73561,
73662..73759,73845..73963,75020..75211))
/codon_start=1
/locus_tag="TSUD_153020"
/note="Tsud_chr3.g37820.1.am.mkhc"
/product="hypothetical protein"
/protein_id="GAU29551.1"
/transl_table=1
/translation="MGMMSLMVALNYYVASDVDRNIVHDHAQVVPLTLFVAVLCLCFL
IGHLFEGNRWINESIVAIIVGCIAGGILLLITKGKSSHILTFNEEVFFIYLLPPIIFN
AGFQVKKKRFFHNFFTIMLFGVIGVFISASIITCGSWWLFPKLNFHDLTVRDYLALGT
IFSSTDTVCTLQVLHQDDTPLLYSLVFGEGVVNDATSVVLFNAVQKIDVSKLDGRTLH
VIGDFLYLFSTSTALGVIAGLITAYILKTLSFGRHSSVREISMMMIMAYLSYMLAELF
ELSGILTVFFCGISMSHYAWHNVTEISRITTRHVFATMSFIAETFIFLYVGMDALDIA
KWKMTKLGFGNLIGIYGGLIFLILLGRAAFVFPLSALANYMNRRSEQTPSITFKHQII
IWWAGLMRGAVSIALAFKQFTYSGVTSDPINATMITNTIIVVLFTTLVFGCLTKPLVR
YLLPHHATKVNTSHAEETTIPAEDMNLPLLSFEESAATNLSRAKESLSMLIESPVYTI
HYYWRKFDDAYMRPIFGGPRANHLDC"
CDS complement(join(70048..70335,70864..70947,71057..71119,
71215..71359,71593..71694,71773..71873,72461..72527,
72685..72731,72980..73171,73253..73299,73502..73561,
73662..73713))
/codon_start=1
/locus_tag="TSUD_153010"
/note="Tsud_chr3.g37810.1.au"
/product="hypothetical protein"
/protein_id="GAU29552.1"
/transl_table=1
/translation="MLFGVIGVFISASIITCGSWWLFPKLNFHDLTVRDYLALGTIFS
STDTVCTLQVLHQDDTPLLYSLVFGEGVVNDATSVVLFNAVQKIDVSKLDGRTLHVIG
DFLYLFSTSTALGVIAGLITAYILKTLSFGRHSSVREISMMMIMAYLSYMLAELFELS
GILTVFFCGISMSHYAWHNVTEISRITTRHVFATMSFIAETFIFLYVGMDALDIAKWK
MTKLGFGNLIGIYGGLIFLILLGRAAFVFPLSALANYMNRRSEQTPSITFKHQIIIWW
AGLMRGAVSIALAFKQFTYSGVTSDPINATMITNTIIVVLFTTLVFGCLTKPLVRYLL
PHHATKVNTSHAEETTIPAEDMNLPLLSFEESAATNLSRAKESLSMLIESPVYTIHYY
WRKFDDAYMRPIFGGPRANHLDC"
CDS complement(82399..85158)
/codon_start=1
/locus_tag="TSUD_153030"
/note="Tsud_chr3.g37830.1.au"
/product="hypothetical protein"
/protein_id="GAU29553.1"
/transl_table=1
/translation="MAEIAVSLVVDQLLPLLREEAKLLRGVHKEFADIKDELESIQAF
LKDADKRAASAEGDNTSEGVKTWVKQVREVAFRIEDIIDDYLIQVGQKPRDPGCVDLV
CKIKTMIPRRRIVSEIQDIKSSVCSIKERSERYGFQRSLEQGSSNSRGSWDAKWHDPR
VAALYIEEGEVVGYEIQRERLIDWLIKGRDERTVVSVVGMGGQGKTTLAKKVFDSKNV
VGHFDCRVWITVSQSYNVEGLLRDMLLKFYKQKGEDPPKDIFQMDRGSLTDEVRNYLQ
QKRYVIVFDDVWIVHFWDDIEYAIIDNKNGSKIFITTRNLDVVVSCRKSSFIEVLELQ
PLTQEQSLELFNKKAFRFDYGGCCPKELITIAYDIVKKCKGLPLAIVSIGGLLSAKEK
NVFEWQRFSENLCFELMKNTHLIGIKEILGLSYDDLPYYLKSCLLYFGIYPEDYEVNS
KRVIRQWIAEGFVKEERGMTLEEVAEGYLTELINRSLVQVSSLRFDGKAKGCRVHDLI
RDMILEKFEDLNFCKHISEDGQSSLSGTVRRLSISTSSDDFIDRIESSHVRSIFVFTN
KKSDTFAKRIPSKCRWLKVLDYESTPLFNIPKKFGNLIHLKYLSLGYITAGKIPNSIG
MLQNLETLNLKATSVSELPKDISKLRNLRHLIGSGLSLIQLNNGIGEMTSLQTLRYVN
LGMDGAADVIKELGKLKKMRELGLLNVRREDYNVLSSSINEMQHLEKLHVKLSSTAND
EFIDLNLISPPTKLRKLTLRGKLHKLPEWILELRNLVVLRLKLSGLTKDPMQSLKSLQ
NLLILSIGVGAYGGSHLYFQDGWFQKLKELDIGSSDELRDIVIDKGALSSLKKLQLYG
LPRLKNIPIGIQHLEKLEVLHIRSMQVEYLQHKSPEDWNWIMEHVPFVEISTSDGDIV
SNSRR"
CDS complement(join(86363..86559,86996..87479,87589..87719,
87825..88109,88259..88297,88733..89237,89353..89474,
89575..89868,90217..90301))
/codon_start=1
/locus_tag="TSUD_153040"
/note="Tsud_chr3.g37840.1.am.mk"
/product="hypothetical protein"
/protein_id="GAU29554.1"
/transl_table=1
/translation="MALSSVFSLLFLHCSLFVALVSGCKTLQGSPPVVIARGGFSGIF
PDSSLPSYNLALKASSPNITLWCDVQLTKDGVGICFPDIKLDNATDISIVYPGKAKDY
SVNKVPTRGWFSLDFKFYELANVSLVQGVYSRTNKFDGSKYHISTVENVAKLVKSPST
GLWLNVQHDTFYKHHNLSVEKFLLSLSTKGVSINYISSPNVDFLRRVRSKSSLKKTVT
IFRFLEQYKIEPTTNKTYGALLRNLKFIRPFASGILVPKGYIWPVDSQLYLQQHTSLV
SDAHKQGLKVFVSDIVNDVPFSYNFSYDPMAECLSFIDNGNFSVDGILSDFPVTPSAA
INCFSGLGRHAKKQVETLIITKYGASGDYPACTDLAYKKAKSDGADVIDCPVQISKDG
VPFCLSSIDLSKSTTISDTKFRNRAAIIPEIQNGSGIYTFSLTWNEIKTLTPSILKPF
EKYLLFRNPKFKNQGKFVTLSDFLSLTKGYGILINIENAAYLAEKRGLSVTKAVLNTL
KKSGYDEQRSPKVMIQSTHKSVLKIFKDKSKYERVYKVGENIRDADNKAIEDIKTFAD
SVVVQKTSVFTQSEAFLVNSTNLVARLQSFKLPVYVETFSNEFVSQAWDYYSDAFVEI
NSYVVGAKVNGIITDFPKTAVRYTKNKCLKHGNKAPYISPIQPGKLLKQVTDFYLPPP
SPPLPVLHDSNVTEPPFPSVSKKLPIFGAAR"
assembly_gap 101437..101835
/estimated_length=399
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 103951..105821
/estimated_length=1871
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 106612..108235
/estimated_length=1624
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
CDS complement(join(110808..110824,110875..110989,
111161..111268))
/codon_start=1
/locus_tag="TSUD_153050"
/note="Tsud_chr3.g37850.1.sm.mk"
/product="hypothetical protein"
/protein_id="GAU29555.1"
/transl_table=1
/translation="MTNLHNNEYLGVLFMLNSCPKLELLTFDLGFGRVLDKAPNEYYS
SEVEDEDEYSDVNDVEEEEYSSYGGGENQIGGRDQ"
assembly_gap 118564..118752
/estimated_length=189
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 128186..128389
/estimated_length=204
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 131726..132693
/estimated_length=968
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 133812..133953
/estimated_length=142
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 136936..137647
/estimated_length=712
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 138541..139478
/estimated_length=938
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 141701..142323
/estimated_length=623
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
CDS 151027..151359
/codon_start=1
/locus_tag="TSUD_153060"
/note="Tsud_chr3.g37860.1.am.mk"
/product="hypothetical protein"
/protein_id="GAU29556.1"
/transl_table=1
/translation="MVVAGRPVYPGRSYQSSKQFTILLTVRDARNVGMVIREVPSRTT
PIQFLRELECNNLDSTIICNLGILRECTMPGWRVLTQKEIGCDGAPERSTILVPARAR
IPWRTSCD"
CDS complement(151130..151432)
/codon_start=1
/locus_tag="TSUD_153070"
/note="Tsud_chr3.g37870.1.sm.mk"
/product="hypothetical protein"
/protein_id="GAU29557.1"
/transl_table=1
/translation="MIPSFQTHRTSARVEAATRPSTPSLSRKRFSRESSPVRVQGLSS
ARALRHNQSPFGSRLAIRASCTPAVSPNYILWWSLNCCTPALARIVWESSSKGLPE"
CDS join(151888..152565,154212..154361,156890..157615)
/codon_start=1
/locus_tag="TSUD_153080"
/note="Tsud_chr3.g37880.1.am.mkhc"
/product="hypothetical protein"
/protein_id="GAU29558.1"
/transl_table=1
/translation="MNKKFQILLFLFLFNSFSLFLYFIHHHSFLNPSSSSSKFDHNTF
TKNPPFQRPFEKLQQTHILKSWPILPSYLPWSQGSNVIPLRSCEGYFGNGFTRRIDVF
SGGGGVGGVGGGGWFRCWYSETLRSSVCEGGRVKMVVERIGMAKGGENLVDVIGRSED
EELPLFEKGAFEIDGGEGFVDKGNKMVVDDEFLDSYVPRGEIMRHTMRDLISKTRIVG
RKEFDCDQWIEEPTLLVTRFEYANLFHTVTDWYSAYVSSRVTGLPNRPHLIFVDGHCM
AQLEETWKALFSSVRYAKNFTGTVCFRHAIFSPLGYETALFKGLTEDIFCEGTSAQEL
WQNPDNQKTARLSEFGEMIRASFGLPLNLNHPGKPVSGGHNVLFVRREDYLAHPRHGG
KVESRLTNEAEVFESLNNWASNYKGCKINLVNGLFAHMSMKEQVRAIQDASVIIGAHG
AGLTHIVSALPKTVILEIISSQFRRPHFAYIARWKGLEYHAINLEGSYANTETVIDEL
VSIMKSLRC"
CDS 161446..161688
/codon_start=1
/locus_tag="TSUD_153090"
/note="Tsud_chr3.g37890.1.am.mk"
/product="hypothetical protein"
/protein_id="GAU29559.1"
/transl_table=1
/translation="MVVCLPSTPKKLAMSIACSVSGAVVLAIGGYLSYVNVEPQRART
MARDKFVLDTLKKKYGYIPPSEVRRMARDDSPKEHK"
assembly_gap 161808..163077
/estimated_length=1270
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
CDS join(170413..171343,171699..171833,171951..172205,
172661..173418)
/codon_start=1
/locus_tag="TSUD_153100"
/note="Tsud_chr3.g37900.1.au"
/product="hypothetical protein"
/protein_id="GAU29560.1"
/transl_table=1
/translation="MAEMAVSFAIDKLLPLLTEETKLLRGVHKEFSDIKDELESIQAF
LKDADKRAVADGNNTGEGVKIWVRQLREAAFQIEDIIDNYMMYVEQQPRNPGCAALLN
NFSHLFKTLKQRHQIASGIRDIKSLVSRIMERSQRYGFQRSLDQGSSNSSGSQNAKLH
PLREDALYIDEADVVGFEAPKKTLIDWMLEGGEDPTVISVVGMGGQGKTTLVKKVFDN
KDVIAHFDCRVWITVSQTYDVEKLLRDMLLKLYKQKGHNPPQNINQMDQRSLTEEVRN
YLKPKRYVVVFDDVWSEKFWNDIKFAVISDNKRGKKLIGIATEIVQKCKGLPLAIVAI
GGLLSRREKNEFEWQRFSEDLKDYQVKSTRVIRQWIAEGFVKEERGKTLEEVAEGYLT
ELIHRSLVQASSIRIDGKANVCCVHDQIREMILEKFEDLNFCMQISEVEDGIGEMTSL
QTLRSVGLYTDGAAKIIEGLGKLKQMRDLRLYGVRREDGIILSSSINEMQHLEKLVVE
TRRGEEVLEVIDLDLISLPTKLRKLTLKGTLQKLPEWIPKLQNLVELRLWYSRLTEDP
LKSLNCLQHLLSLSIEKYDGWRLHFEYGWFQKLKELKVRICTYLREVVIDKGALPSLK
KLNLNELWSIKNIPTGIQHLEKLEVLIISYMPDEFVQKISTEDWNLMQHVPLVQISGK
HGILIPHPRS"
assembly_gap 171485..171667
/estimated_length=183
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
CDS join(177133..179750,179966..179972)
/codon_start=1
/locus_tag="TSUD_153110"
/note="Tsud_chr3.g37910.1.au"
/product="hypothetical protein"
/protein_id="GAU29561.1"
/transl_table=1
/translation="MMRGVPIEVEDVRNLLENIQEFTDNVAEEGGIMEEIELRDKKQL
REAAFLVEDAIDEYMIREEQKPPDPGCACEIIDFIKTMILRHQIKCKFNHLNSQFAVN
KEIHCFSEQESRSRGNKKATTTLRNLLRAPLYRNDIVGFEAPKAKLIGWLLKEKEERT
VICVVGMTGLGKTTLAKKVYDKKKVTRHFDDYCVWITVSQSYTVEELLRQLLSNIYRQ
SEYYYHHHPQDISEMDRQSLAIEVRNYLRQRRYAIFFDDVWNTNFWSEIEFALPDNMN
GSRILITTLKMDVALCCERSSFVEIHEMQPLNLAQSFYLFNTKAFFDIGGRCPSNLRD
VCLDMVIKCKGLPLAIVVIGRMLSTKDRNAFEWHKLSENIHSEMINNPILTVITQSYG
LVYDDLSSYLKLCLLYCAIYPEDYEIKPKRLIRHWIAEGFIKHISGRTLEKIAEEHLQ
ELIQKCLVQKSFVRFGGKVKGVCIHSLFLVLLRQKARDYSFCKFVIGHDRSLCGIIRR
LSIATTSDDLLESIESSHVRSLLFFTKGELSESLVKGIPTKYKLLKVLDFENSRLLDV
PENVGDLIHLKYLSFRNTHIESIPKSIGKLQNLETLDLRQTNANELPKEISKLGKLQH
LLGDNMSLIRLKGGIGGMESLQTLRDVRIDEDGTDLITELGKLTQLRKLSLIDVREGQ
GIALCSTINEMQHLEKLYIEAESKDAAIDLSFVSFPTMLRKLRLQAKLNKLPEWIPKL
ENLVDLSMSYSQLTEVALESLQNLPCLSVLTLGDCSYEGLSLHFQDGGFQNLKELEIR
WLSNLESIIIEKGALPSLKRLTFINIPNLKTASGIDYLENLDVLDNYLTPTEFDKIIA
PLAKLIKEKVLDYEKRRY"
CDS join(182552..182770,184951..185135,185279..185675)
/codon_start=1
/locus_tag="TSUD_153120"
/note="Tsud_chr3.g37920.1.am.mk"
/product="hypothetical protein"
/protein_id="GAU29562.1"
/transl_table=1
/translation="MVFSLTVSFGSDIVLRTTHHQTSRLINCKLLFCKTQHKNNLGFN
LSNQKTNHTAIFVSKQESIQFDERKSPNEISNLLDCTTWSGAGPGLMDAVTQGALLAG
KPVGGFKIGKEAGEWTASNFHPYLPSENYLTCRFFSARKHGLVDAVVRNNSFDKTAVV
ALPGGIGTLDEVFEMLALIQLERIGSKLPVPFLLMNYDSFYSKLLDFLDVCEDWGTVS
KGEVASLWKVCNSNSEALAYLEDFYRTSSGDTSQKNETKLHSTHDLSF"
CDS complement(join(187910..187989,188077..188169,
188271..188596,188694..189088))
/codon_start=1
/locus_tag="TSUD_153130"
/note="Tsud_chr3.g37930.1.au"
/product="hypothetical protein"
/protein_id="GAU29563.1"
/transl_table=1
/translation="MYLDLDKSMSVNSTYLMLESAHKDAFKSFHLYDHNYKLCPSVEE
WKRVEKICAFLLPFCQTASIINSSTAHPTSNLYFLQVWKVQCVLVECLGVEDEGIKRM
AERMMSKIEKYCYSCIGSGSRPTDKVVKIGLSLKTHHQQLIPETGMSQLDIYLDESNL
SFHLYEDLDVLQWWKRNNDRFPDLSILACDLLSVPMTTVASTRDFCMGYRVFNKYKDR
KLPRNMDARFCTRSWLYNFGSNDGDDNEDSEGIMIEIDHDDVMDDSNFEDDDDGMVVR
LSASTSRSDSREAMSPMPSFI"
CDS complement(join(190156..190407,190577..191395,
191474..191572,191656..192459,192545..>192667))
/codon_start=1
/locus_tag="TSUD_153140"
/note="Tsud_chr3.g37940.1.am.mkhc"
/product="hypothetical protein"
/protein_id="GAU29564.1"
/transl_table=1
/translation="NIDETLRTLRFGEKVRSIRNNPIINVIKEADDVSGKIRHLKEEL
IRVKAGEAHSLVGGNNGCFQGHNVRESLNQLRVNLNRSLLLSNLDDNTDKAANVGEDD
IRQLRQQIDEYSSCDGNPKYISVSEDHVQFDSFDENYDADTTIGEENSVGDSISVISC
RKSPILNGPELSESPKFSKNQRKSVAFSSSYLGSRNNVSDSSTFGNDLSGKSFKQGEH
MRTSLQSGKAESLAESLQRGLQIIDYHQQNSALNKSSSSFSFGRLTLTPCPEIDKVEP
YDQTIQHNIASDEVTSSFLCASCRTDLTEKVPKHLENVLEKSKMREKELENVCKEQAA
RIEQLNQLVEKLKGENNLNSVSGTSSNGGTPYTIEEKCEIKEVQEQSDRRDIFSDSTE
KESLLLEIQSLRRRLQLFNDGPVKMSTDKLRSSLMCRSMQLQKSGVFSRDSSNEDLEN
ERQRWTEMESDWICLTDELRADLESYRQRAEKLETELDLEKKGTEEMDDALKRAVNGH
ARMVEHYSDLQEKYDDLASKHDAMKEGIAEVKKAVTKASRKGKARFAKSLSAELSALR
LERERESKLLKKENLCLKIQLRDTAEAVQAAGELLVRLREAEQAASVAEENFANVRRD
YEELKMEVEKLNRKHKTEINTMKQYLTESKLPESALKPLYQENSDTIHNDTNSSYAYD
DQAWRAEFGAIYQDHY"
assembly_gap 193195..193599
/estimated_length=405
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
CDS join(207418..208278,209399..209458)
/codon_start=1
/locus_tag="TSUD_153160"
/note="Tsud_chr3.g37960.1.am.mk"
/product="hypothetical protein"
/protein_id="GAU29565.1"
/transl_table=1
/translation="MDSPQSVVSPFRTSILGEGEKQKSDVLTQSNGPSSKDIEVNGKE
TIMSNAEECVGVLEVYIHQARDIQNICIYHKQDVYAKIYLTNNPENTVSTKTINGGGR
NPVFNDNLRLNVWDVNSSLKCELWMLSRVKNYLEDQLLGFALVPLSEVLVQNGKLEKE
FSLSSTDLFHSPSGFVQLSIAYTGATPDVMAISEMPGKVANHVTVQDSETSESLARDL
DKIEFPDPKIVNEDHLMVSEYFGISCEEAQCSDSLATSEADDHSSEAGVRLVESFSAC
SEESVQVQPPKVTGNITLYSHKLVAILTVT"
CDS join(207418..208278,209105..209173)
/codon_start=1
/locus_tag="TSUD_153150"
/note="Tsud_chr3.g37950.1.au"
/product="hypothetical protein"
/protein_id="GAU29566.1"
/transl_table=1
/translation="MDSPQSVVSPFRTSILGEGEKQKSDVLTQSNGPSSKDIEVNGKE
TIMSNAEECVGVLEVYIHQARDIQNICIYHKQDVYAKIYLTNNPENTVSTKTINGGGR
NPVFNDNLRLNVWDVNSSLKCELWMLSRVKNYLEDQLLGFALVPLSEVLVQNGKLEKE
FSLSSTDLFHSPSGFVQLSIAYTGATPDVMAISEMPGKVANHVTVQDSETSESLARDL
DKIEFPDPKIVNEDHLMVSEYFGISCEEAQCSDSLATSEADDHSSEAGVRLVESFSAC
SEESVQVQPPKILEQKLRFGFSVVMQLWISVVR"
assembly_gap 208322..209092
/estimated_length=771
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
CDS complement(join(210121..211506,212078..213324,
213747..215199))
/codon_start=1
/locus_tag="TSUD_153170"
/note="Tsud_chr3.g37970.1.am.mkhc"
/product="hypothetical protein"
/protein_id="GAU29567.1"
/transl_table=1
/translation="MENQNLHSISFYLSQPTSNCYQETNNSININISKENQQHFSNFL
TSLASCKNTSSSLRNLEFHRVEWESQQVKHLETLLRNHENVKQIVFIRNRFNGKSMKD
LSDILKENKVIKEIMFSESCIGSNGAGLIGSSLMVNHSLEELQIWEDSIGSRGAEEIS
KMIEVNPNLKLLTIFDSNAITATPLISAVLARNRTMEVHVWCGDQNGEKSSKVVEFVP
GNSTLRIYKLNLSGTCRVACSLGMNFTVKSLDMTGVKIKSKCAKEFRWVLEQNQTIKE
VNFSRTCLKDKGIVYVAAGLFKNHSLQTLHLTGNWFRGIGVEHLLCPLSRFSSLQMQA
NITLKCVTFGGGRTRIGRDGLAAITQFLITNETVTRFGIHDDESLRPDDFVKIFKSLE
KNASLKCLSLQGCRGVQGETLLQTIMETLQINPWIEEIDLSRTPLHNSGKTNGIYQRL
GQNDNPEPEMDLIKDMPLTEPKSCRVFFCGQECAGKTTLCQSVSQNFSSSAALPYLDQ
VRTIVNPVEQAVKTAGMKIKTFKDENTKISIWNLAGQHEFFSLHDLMFPGHGSASIFI
IISSLFRKPGNRELKSTAEIEEDLQYWLRFIVSNSKRAVQQCMLPSVAVVLTHFDKIN
QSSQNLQQTVDSIQRLRDKFQGYVEFYPTVFTIDARSSASVNKLTHHIRKTCKTILQR
VPRVYQLCNDLIQILSDWRSENYNKPAMKWKEFGELCQVKVPYLRIRSRHYNKEAVEM
KRKAVATCLHHIGEVIYFDELEFLILDCEWFCGEVLGQLIKLNVRKHHSSENNGFVGR
KELEKILRGSLQSPIPGMGSKVFENLDASDLVRMMLKLELCYEQDPSDQNSLLLIPSI
LEEGRAKPQKWQISSPDCLYAGRHLECDDSSHMFLTPGFFPRLQVHLHNKIKSLMNQH
GATYSLEKYLISISINGIYIRVELGGQLGYYIDVLACSTKNLTETLRVIQQLIIPAIQ
SVCQGITMTESVIRPECVRNLTPPRYRRTQFASLQQLKQALLSLPADSMYDYQHTWCS
VLDSGRPVLHEGFDFARDLLSDDDFREVLHRRYHDLHNLAQELQIPPENNPEGQDPAV
TLSSEAERVEPTFGGIAKGVEEVLQRLKIIEQEIRDLKQEIQGLRYYEHRLLLELHRK
VNYIATFNSQVEERKVPNMFYFVKAENYSRRLITTMVSGLTALRLHMLCEFRGQMHVV
EDQMGCEMMQVDNMAVKSLAPYMKKFMVMVTFALKIGAHLAAGMGEMIPDLSKEVAHL
AGSSVLFGAAGATAAGLAGAAAIGRRNRSTEGSRGIQQDMKAAQQWMVDFLRERRCST
GKDIAEKFGLWRVRYRDNGQIAWICRRHMYARSAEIIEVPI"
CDS complement(join(<231758..232169,233935..234032))
/codon_start=1
/locus_tag="TSUD_153180"
/note="Tsud_chr3.g37980.1.sm.mkhc"
/product="hypothetical protein"
/protein_id="GAU29568.1"
/transl_table=1
/translation="MLGRSDALRSNLTKPTSCLIEATTGLCLNFQISGAFGVSIGNSG
TNWGPSIPAQGGGAASGYATGNNVYEGGDSSFGLGAAGYGRNSNAVVNPSSTFNASAG
GYDGSYGDLYRSGSGSVYNDSAWRSAASEIDGSGSFGYGLGGIASDDPVKTSEGYIGS
YNVASRQPNR"
assembly_gap 237790..237871
/estimated_length=82
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 250163..252851
/estimated_length=2689
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 254749..256774
/estimated_length=2026
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
CDS complement(join(<258201..258416,258572..259075))
/codon_start=1
/locus_tag="TSUD_153190"
/note="Tsud_chr3.g37990.1.am.mkhc"
/product="hypothetical protein"
/protein_id="GAU29569.1"
/transl_table=1
/translation="MPSVKPNPSDKDSEPFVETDPTGRYGRYNELLGSGACKKVYRAF
DQEEGIEVAWNQVKLRNFSNDPAMIDRLYSEVRLLRSMTNKNIIALYNFWRDEDHNTL
NFITEVCTSGNLREYRKKHKHVSVKALKKWSKQILEGLNYLHLHDPCIIHRDLNCSNV
FVNGNTGQVKIGDLGLAAIVGKNHSAHSVLGTPEFMAPELYEENYTEMVDIYSFGMLV
LEMVTLEIPYSECDNVAKIYKK"
assembly_gap 264555..264625
/estimated_length=71
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
CDS join(271106..271892,273132..273295,273363..273971)
/codon_start=1
/locus_tag="TSUD_153200"
/note="Tsud_chr3.g38000.1.am.mkhc"
/product="hypothetical protein"
/protein_id="GAU29570.1"
/transl_table=1
/translation="MATLETISAALNLIDTKKQNLKTAFENLQSHSSFHHSLPLSWFE
LDSHFTTLQNSLTNRFEILQSLEQSHSRSQSKTLISNPKDKNFYVNANDPSSSRNKLR
VLCEKIDGRGLRNYILDNFKDRIRIQEELIEEFRCAPDAGGMVLQSLEGFYVLNDKFN
DKGLRRMGRICNTLLKLLGLAGVNVSSKVKEKALKVALEWKERMRDDYRNIVGALGFL
YLIYGFGIFSEFSMDELVEYASRASVNGEFMKLCRDIGMTDRVPEIVQKLVDRGKHVL
AVKYVFEFNLAHKIPPVLILKAGVEEAKQLARRLSEEGKPRMEIINREIHTLKSIIEI
IVIHNLESEYPRASLDQRIEQLKGQDANMKDSTPASILNQQHPLQQQRKRSMNQQQQN
EIKLPRTSTSVGPAGVLKSITGDNSTICQHQQPPVNPSGLFPEHPYPYMSSPAMPPGM
MGPTLTRPSYPGPSAGTYGFAGNPIGPNLGGSHMIHSSEPHMPSAYYDSNSTYGGINP
RHHHQEPYYPR"
CDS join(282676..282933,284378..284554,284797..284913,
285109..285376,285475..285640,285724..285873,
286167..286238,288119..288602)
/codon_start=1
/locus_tag="TSUD_153210"
/note="Tsud_chr3.g38010.1.am.mkhc"
/product="hypothetical protein"
/protein_id="GAU29571.1"
/transl_table=1
/translation="MDAGEPQFRRQSSGEIEHQHEDPNRTGSRPDSASDGATTSSNTS
GARYKLMSPAKLPISRSPVLTIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLPRLQQT
GHGFITSSASAAFPVTSVRFNSNTVDDGKYSFFEFKPHGRSNMYLHNALHLSKVPVDF
HNHACEKPAQIDGQGNVQSFVSPLASDDGYNWRKYGQKLVKGCEFPRSYYKCTHPNCE
VKKLFERSHDGQITEIVYKGTHDHPKPQPSRRYSGGNVMSVQEDRSDRASLTSRDDKG
FNNYGQMSHAAERDSTPELSPVATNADSPEGAGFLSNRSNDEVDEDDPFSKRRKMDLD
ITPIVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPSIRLMPGKLMLYTS
TELALRSDDGRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARNNSHD
MAGPSAAGGHTRIRREESDTISLDLGMGLSPRTAENRSNSQGRLMLTEYGENQTHNSN
SSFKFVHNTPPPGYFGVLNNNSNPYGSRENPSDNSSLNHSAYPCPPNMGRILMGP"
CDS complement(290760..292406)
/codon_start=1
/locus_tag="TSUD_153220"
/note="Tsud_chr3.g38020.1.sm.mk"
/product="hypothetical protein"
/protein_id="GAU29572.1"
/transl_table=1
/translation="MQTSQKHEISYGSGRFYVEPVQNLDSYGLPSSENLENYSSSDNS
SQTFYPSHQILEPYGTFESASTSNNSFPYQNSPSTLSFSPNNSPVSKLESNSYLSRPQ
HSLEFVNGSPEDDDSYLRHDLDDLRHKMLELESVMLGPNADMLDIYDAEVKQESASFL
LEAEKWKKNMEIVSKGDLNEMLYTCAKAVDENDMETIEWMVTELRKIVSISGSPVERL
GAYMLEALVSKMASSGSTIYKSLKCSEPTGNELLSYMHVLYEICPYFKFGYMSANGAI
AEAMKDESEVHIIDFQIAQGTQWVSLIQALARRPGGPPKIRITGIDDSYSAYARGGGV
DIVAERLSTLARSCHVPFEFHAVRVSASEVQLEDFELRPGEALAVNFAFMLHHVPDES
VNILNHRDRVLRLAKHMSPKVVTLVEQEFNTNNAPFLQRFVETLNYNSAVYESIDVVL
PRDHKERINVEQHCLAREVVNLVACEGEERVERHELMSKWRMRFAMAGFTPYPLSSFI
NSSIKDLLDSYRGHYTLEERDGALYLGWKNQVLVASCAWR"
CDS complement(join(304554..304821,305005..305184,
305285..305437,305525..306375))
/codon_start=1
/locus_tag="TSUD_153230"
/note="Tsud_chr3.g38030.1.sm.mkhc"
/product="hypothetical protein"
/protein_id="GAU29573.1"
/transl_table=1
/translation="MDISECTRIVFDKIQRFEPEHATKIIGYLLMQDNGEQEIAKLAS
FPDHLIHDVAHNARIELEKLATRSVISSGNHSPASFQVHSPYYNLHNGNTNPEFMTIG
INEHQNRTALFGSENHQHVDSVNSTTANFDYYNYCLEYASAVANLNRKNGRRFSNMTE
FPFKTCHYFSKGYCRHGNSCRFYHHGQAASEIFSQMFGNDAAANDEQAISPGSLAQLE
SEIVDLLKQRGNPISIASLPMAYYDKYKKVLQAEGYLAESQRHGKSGYNLTKLLIRLR
NSIRLIDRPHGQHAVVLAEDAPKFMGKADCQNISASQQIYLTFPADSTFSEEDVSNYF
STFGNVEDVRIPCQQRRMFGFVTFVDPETVKMILDKGNPHYVRGSRVLVKPYKEKPKL
IDRKYPYRLENHVCYSPRYADIDAEIASSPRNCGNPRYLRRLLEEQDRIFELERRRLA
VLQISQKSLSTPPHFGINMNGSRVSNGIGHISA"
CDS join(311010..312162,312373..312918,313011..313051)
/codon_start=1
/locus_tag="TSUD_153240"
/note="Tsud_chr3.g38040.1.au"
/product="hypothetical protein"
/protein_id="GAU29574.1"
/transl_table=1
/translation="MFDPCATVLSCARETLLPILNEAVNMIRGVPNDKVAEMKNELQT
IQEFIHQADKIADADEANSSDDGTREKIKQLIEASFHIQDIIDDYIIHEEQRLPDPGC
VAGNNFVKTKFLRLQIAHNIHSINSRVNEMKDASFKKDNEGSSSSAIDPNDILLQNLR
KAPFKMSEADVVGFEEPRQILIDWLLNGRDELTVVSVVATGGHGKTTLTKKVFDNIKG
HFDYHVWITVSESYNIEELLRGLVKEICLQQSGNPPHIIYEMTNEPLAVIVDALRNYL
QKKRYVLVFDDVCNSSFWDDIKSAMIDNQKGSRILITTRIMDVATSCSESAFVKIHEL
KGLDDEQSLKLFNKKAFHDLEEVCPENLIDISSKIVKKCGGVPLAIVVTGVEGFVKEE
EGMTLEEVAEGYLTELIHRSLVQVVSINIEGRAKTCCVHDLVHDMILKKFEDLSFCKN
IREDGQSALNGIVRRLSITTNSDNLMESIESSQVRLLLVPKPYTLHESIKKITTKYRL
LKVFDAEFAEKFEVPKNLGSLNHLKYFSIGIMKGVLAGLTVLPKSIGMLENLETLDLT
GSYWRNDIPTNSR"
CDS complement(315236..318061)
/codon_start=1
/locus_tag="TSUD_153250"
/note="Tsud_chr3.g38050.1.au"
/product="hypothetical protein"
/protein_id="GAU29575.1"
/transl_table=1
/translation="MIDPCASVLSCARENLLPLARKHLLPLALDHLLPILNEAVNMIR
GIPNDKIAEMKNELETIEEFIHQADKMADDVEGDDQSHGTREKIKQLIEAFFRIQDLI
DEYIIREEQQLPDPGCVDAAYDYVKTKFLRLQIAHDIQIIKSHINEMKDTSTEKDHGF
QIKSSSEQGSSSSAINPNATLLQNLRKAPFYMKEADVVGFEKPRDKLVDWLVKGRDEF
TVVSVVAMGGQGKTTLARKVFDSKEVMEHFRGYRVWITVSQQYNIEELLRKLLKELCE
QQKVNPPQNIHEMNKESLVDKVRKYLQEKRYVVVFDDVWEKPFWADIKFAMSDDQKGC
RILITTRFKDVATSCRESSFVEIHELKGLDDEQSLKLFNKKAFHDLKEVCPPNLIDIS
SKIVKKCGGLPLAIVVIGGQLSCKNRDTIIEWYKFNENIKPKLKKDFVINTFLVPSYH
DLSYNLKSCLLYFGMYPEDCEINSERLIRQWIAEGFVKEEEGLTLEEVAEGYLTELIH
RSLVQVVSFNIDGRATTCRVHDLVHDMILKKFEDLSFCKNISEDGQSASDGIVRRLSI
TTNSNNFMESIVSSQVRSLLVPRPYILHESVVRQITTKYRLLKVFDARLAGEIKVPED
LGSLNHLKYFSIEAAAFETAFTALPKSIGMLENLETLDLVETVFDVPKEICKLRKLRH
FLGFKLNLVELKDGIGGMTSLQTLHTVCLNNNDEDRELIEELGKLKQLKELGLRGVMR
KHRSVLSSSINKMQQMENLSIESDEDIIDLDLNLPKLQYLVLRGQLEKLAEWIPKHQN
LVELRLYESKLTEDRMKLVKSMPNLLSITLWNNAYVGETLHFQNEWFKNLKELYLICM
DNLKSILIDQGALPSLEKLYIYIAPQLQRLPTGIQRLKKLESLTIRYASEELIENILL
NGGKDHWIFKQVPFVEIYDQNRKSIFN"
assembly_gap 322744..326294
/estimated_length=3551
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
CDS join(330875..332426,333344..335094)
/codon_start=1
/locus_tag="TSUD_153260"
/note="Tsud_chr3.g38060.1.au"
/product="hypothetical protein"
/protein_id="GAU29576.1"
/transl_table=1
/translation="MVRTNQPTPDNIPAAVPIDQSQNPFYIHSSENPAISLVNPVLDG
KNYHSWARSMKNAIIMKNKLRFLDGSSLMPVAFDPSYESWMRCNNLVLSWIQNSVNSS
IAQSIVYYDVAATAWNDLKSRFSRADRVRVASLQRELYALRQDSTPVLEYFTKVRGLW
EELEIFRPIPHCTCLARCQCEAMRNARKFKQEDLILIFLTGLNDHYAAVRSQILIMEP
FPDLNTVFSMIVQHESLNSLEVADDSTIGLNLAEARKNNGYKGKNAYNAGNNGYSNKT
CTYCGKSGHNIDICYRKNGYPPGFKYKDGSVPKSLMANAAASTSSSTKQDSKPFMGFS
EAEFQALRKLLQNSQVGTTSQMNQFASNLMDKASSSSPIEETRGNFYVNYNSLSNSVD
MWIIDSGATHHACYSLSMFSKYTKIKPIPVRMPNGSMAQTDIIGEVQVTDLITLQNVL
YLPHFKYNLLSVSRVTHSLNCTFAFTDRICAIYDSQQKMIGSVRLHNGLYYLESTGSS
IDMVNNTQSGQMPYQKLYNQLPDISMLRFFGCLCYVSTQENHRLKFDNRARKCVFLGY
KSVMKGYISLDLHSFEIMVSRHVQFEELIFPYQSQSKSTSTWEFIIPTTTQPLVSTPA
TEDMPTNHTLPKQTTNTPTNNSPSTTRKSTRPKKVPTHLKDYACNNVTKSILYPITQY
TCHDNLSTKQKSYTMSLLTENEPTTYSEACKHEQWIKAMKTELQALQQNNTWTIVYLP
PEAKPIGSKWVYKIKRKSDGSIERYKARLVAKGYNQVEGIYYFETFSPVAKMTTIRVV
LAIASMQNWFIHQLDVNNAFFHGDLCEDVYMKIPQGLEGFSDDKVCKLTKSLYGLKQA
SRKWYEKLSYFLTLHKYTQVPSDPTLFVKKTASTFTALLVYVDDIVLTGNNMEEINYV
KEELHKTFGIKDLGILKFFLGLEVAHSNKGISLSQRQYCLELLAETGDLGCKPSSVPM
DPGHKLHHDDSTPHQDITGYRTLVGKLLYLTNTRPDIAFPVQQLCQFLDCPTVLHYKE
AHKVLRYLKGCPGTGLFFPRSSDTHLVGFTYADWGGCIDTRKSITGYCFFLGSSLMLE
VQKAANHFKVII"
assembly_gap 332520..332781
/estimated_length=262
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 337139..337149
/estimated_length=11
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 338804..339966
/estimated_length=1163
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
CDS complement(join(348376..348593,348690..348939,
349225..350625))
/codon_start=1
/locus_tag="TSUD_153270"
/note="Tsud_chr3.g38070.1.au"
/product="hypothetical protein"
/protein_id="GAU29577.1"
/transl_table=1
/translation="MEHFGYRVWITVSQPYNIEELLRKLLKELCEQQKVNPPQNIQEM
NKESLLKRVRYYLQKKRYVVVFDDVWEKSFWADIKFAMSDNQKGCRISITTRFKDVAT
SCRESSFVEIHELKGLDDEQSLKLFNKKAFYDLNGCCPENLVDISSKIVEKCDGLPLA
IVVTGGLLSAKNRNAIEWDMFNENFKPKLKEHSVINKILVPSYHDLSYNLKSCLLYFG
IYPEDYEVYSKSLIRQWIAEGFVKEEEGLTLEEVAEGYLTELIHRSLVQVVSVGINGA
IWCRVHDLVHDMILKKFEDLNFCKNISEDGQSASDGIVRRLSITTNSDNFMESIESSL
VRTLLVPKPCTLHESVVRQITTKCRLLKVFDGELAGGINVPEDLGSLNHLKYFSIEAD
KYGTAFTALPKSIGMLENLETFGVTQRNFTDERVIDVPKEICKLRKLRHFLGHKLNLV
ELKDAIGGMTSLQTLPTMQQMENLSIESSDEDIIDLDLNLPKLQYLLLEGQLEKLAEW
IPNHQNLVQLELTSSKLTEDPMKLLKSMPNLLSIYLIYDAYVGALPSLEKLFISLRQL
ERLPTGIQHLKKLELLDFRFMSEEFMENILQNGGRDHWIFKQVSSVQIYDENGKCI"
assembly_gap 349004..349156
/estimated_length=153
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 354510..354894
/estimated_length=385
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
CDS complement(join(360539..361003,364199..364924))
/codon_start=1
/locus_tag="TSUD_153280"
/note="Tsud_chr3.g38080.1.au"
/product="hypothetical protein"
/protein_id="GAU29578.1"
/transl_table=1
/translation="MIDPCASILSCARENLLPLARKHLLPLARDHMLPILNEAVNMIR
GVPNDVIKHMKHELETIEEFIHQADKMADADETNSSDGTRQKIKQLIEAFFRMQDLID
EYIVRVEQQLPDPGCAAGASHYVKTKFLRLQIAHDIQKIKSQINEMQDTSIEKDHGFQ
IISSSEQGSSSSAINPKATSLQNLRMAPFYMKEADVVGFEKPRDKLVDWLVNGRDELT
VISVVAMGGQGKTTLARKVFDSKELEKLPEWIPKHQNLVQLVLNSSKLTEDPMKLLKS
MPNLLSIYLIYDGYVGETLHFQNEWFKNLKELQLYCMDNLKSILIDQGALPSLEKLYI
NSVPRLHRLPTGIQHLKKLELLDFRVMSEEFRENILLNGGKDHWIFKQVPSVRIVDLI
DKSI"
assembly_gap 361167..364182
/estimated_length=3016
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
CDS complement(join(374957..376191,376295..377329,
377522..377770,377842..377965))
/codon_start=1
/locus_tag="TSUD_153290"
/note="Tsud_chr3.g38090.1.au"
/product="hypothetical protein"
/protein_id="GAU29579.1"
/transl_table=1
/translation="MWGGVISCARENLLPLAREHLLPVARDHLLPILNEAVNMIRDKM
ADAEGANSGDGTREKIKQLIEASFRIQDLIDEYIIREEQQLPDPGCVDAASDYVKTKM
LRLQIVHDIQIIKSQINEMKDTKRTVVSVFAMGGQGKTTLAKKVFDNPKVVQHFDCHV
WITVSQQYNAEGLLRHMLYKLEKDPPERINQMDQDSLVDEVRNCLQQKRYVVVFDDVW
DICFWDEIDLAMIDNKNGSRIIITTRNVDVVNACKKSAFVDQYELKGLNDEQSLELFN
KKAFHDLNGCCPENLVDISSKIVKKCHGLPLAIVVTGGLLSGKKRNAIEWDKFNENFK
PKLKEDSVINKILVPSYHDLSYNLKSCLLYFGIYPEDYEVYSKSLIRQWIAEGFVKEE
EGLTLEEVAEGYLTELIHRSLVQVVSINFDGRACYYRVHDLVHDMILKKFEDLSFCKN
ISEDGQSALNGIVRRLSGRVHDMILKKFEDLSFCKNISEDGQSALNGIVRRLSITTNS
DNFMESIVSSQVRSLLVPRPYILHESVVRQITTKYRLLKVFDARLAGEIKVPEDLGSL
NHLKYFRIEPAEYETAFTALPKSIVLLENLETLDLADDARVYDVPKEICKLRKLRHFL
GYELNLVQLKDGIGGMTSLQTLSMVCLNPNDEDKELIEELGKLKQLKELGLRGVMRKH
MSVLSSSINKMQQMENLSIAADGYIIDLDLNLPKLQYLELRGWLEKLPEWIQKHQNLV
QLDLDDSKLTEDPMELFKSMPNLLSISFNDAYVGETLHFQNGWFKNLKELQLIFMDNL
KSILIDQGALPSLERMRISNAPQLQRLPTGFQHLKKLEHLTIIDVSEELIENILLNGG
KDHWIFKQVPSVQIRDGKFRSIFN"
CDS complement(382010..384910)
/codon_start=1
/locus_tag="TSUD_153300"
/note="Tsud_chr3.g38100.1.au"
/product="hypothetical protein"
/protein_id="GAU29580.1"
/transl_table=1
/translation="MCDPCASVLSCARETLLPLARDHLLPLARKHLFPIALHHLLPIL
KEAVNMIRGVPNDEIAQMKNELETIEDAIYQADKMADAEGADASEETREKIKQLIEAS
FRIQDVIDEYIIREEQQLPDPGCVDGASDYVKTKFLRLQIAHDIQIIKSQINQMKDTS
TETDHGFQSKSSSEQGSSSSAINPNATLLQNLRKAPFYMSEADVVGFEEPRKVLIDWL
VKGRDELTVVSVVAMGGQGKTTLAKKVFDSEEVVKRFEYRIWITVSQSYNIEELLRGM
LKELCKQQNVNPPQNIHEMTRESLVDEVRNYLRQKRYVVVFDDVWNSPFWADIKFAMI
DKQKGSRILITTRFKDVATSCRESSFVEIHELNGLDDEQSLKLFNKKAFFDLEEVCPP
NLIDISSKIVKKCGGLPLAIVVTGSLLCKNRNTIEWYKFNENIKPKLKKDYSVINTIL
VLSYHDLSYNLKSCLLYFGIYPEDCKVNSKILIQQWIAEGFVKEEEGMTLEEVAEGYL
TELIHRSLVQVDLISIDGRVKSGCVHDLVHAMIIKKCKDLNFCKNICEDKPTSLTGMV
QRLSIATDSDNFMESVENSQVRSLHICTPNILPESFLRRIPTKYRWLKVLAVMNDGLL
EVPNDFGSLIHLKYLRFGGFFEEMYLLPLPKSIGMLVNLETLDLTNAMINVNYVMPKE
ICLLRKMRHFLGYKMSLIQLKDGIGCMTSLQTLSEVFLDDGEDENDNRVVELIEELGK
LKQLRKLVLLGVRSKYRSAISSSINEMQQMENLKIHASDVISSTVIDIHLNSPPPMLQ
FLRLQGELEKLPKWISKLQNLVKLRVHNSMLTYDITKLLKSLPNLLSLSIVSCDYKNE
FRRLHFQVGSFMNLKELHLEDLTNLNDILIEDGALCSLSMLVLCRIPKLKTIPTGIQH
LKKFDHLKIYDMNNGFYQKFFLDGGINHLIFKQVPVVEIYVGDDKFTGRTGR"
CDS complement(join(389730..389736,389825..390428,
390604..390715))
/codon_start=1
/locus_tag="TSUD_153310"
/note="Tsud_chr3.g38110.1.au"
/product="hypothetical protein"
/protein_id="GAU29581.1"
/transl_table=1
/translation="MVRGVPLEIARMKHQLERIEEFISIADKVADAEENNKKDVIDEY
TIREEQQLPDPGCAAFAANYVKTVSLRLQIAYKIQNIKSRIDEIKDTSNEKDDGFPQI
QSSWKQGSSSCEVLYNIRSSPFHIDEADVVGFEEPNFFLIDWLVEGRAERTVLSVVAM
GGQGKTTLAKNVFDRNMVIKHFDCRVWITVSQSYNVEELLKDLLQKLYKQNGQDPPRS
INQMDRDSLVDEVKNCLQHKRY"
CDS complement(391655..394378)
/codon_start=1
/locus_tag="TSUD_153320"
/note="Tsud_chr3.g38120.1.au"
/product="hypothetical protein"
/protein_id="GAU29582.1"
/transl_table=1
/translation="MCDPCASAHSCVRYLLPLARDHLLPVARKYLFPLALDHLLPILK
EAVNMIRGIPNDEIAHMKHELETIEEAIHQADKMADAEGDDQSHGTREKIKQLIEASF
RIQDVIDKYIIREEQHLPDPGCVDAASDYAKTKILRLQIAHDIQNIKSRISEIKDTSS
KKDHEASSSSATNPNATLLRNLQNAPLYMDEYDVVGFEVPRDKLVDCLVKGRDKLTVV
SVVAMGGQGKTTLAKNVFDNNTVVKHFDCRVWITVSQPYKLEGLLKDLLHKLYKQMGR
DPPPSIDQMDRDSLVYEVRTNLQQKRYVVVFDDVWNIHFWDEIQLAMIDKKNGSKILI
TTRNMDVAKKFSSVEVHELKSLTKEQSLDLFNKIAFSDLDGCCPENLIETSSKIVEKC
NGLPLAIVVISGLLSFKNRNALELYKFNENIISSELKGRHSSISKILGHSYHDLSYNL
KSCLLYFGIFPEDSELCPKPLIRQWIAEGFVKDDWGRTLEEVAEGYLTELIHRNLVQV
VSVSVDGRTKYCRVHDLVHAMILEKFEDLSFCKTINVDGQSTLTGITRRLSITTNSDK
LMESINSSHVRSLFYINSNLSESFVRKIPTKLLKVLVLKDDELLEVPEDFGSLIHLKY
LELNGTFRKNCYVIPISIGMVENLETLDLRFAFSCKMPKEICKLRKLRHLIGNNITLS
GLKDDIGGLTSLQTLRGIYLYEYEDYEDDDNRVTDLIQELGKLKQLRELALSGVKTSY
MSVLSSSINKMQLLEKLFIESFDEYTFIDMHLNSPPPMLRHLKLIGRLEKLPEWIPKL
KNLVKLKLKHSDLKHDAMELLKSMTNLLTLSLRKNAFGDKRIHFQDGWFKNLKVLILA
LLFCVESIHIDEGALPSLETFEFYHTQNVFPTGIQHLKKLKLKDVSFLSKA"
assembly_gap 396399..403733
/estimated_length=7335
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 404003..404784
/estimated_length=782
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
CDS complement(412795..415689)
/codon_start=1
/locus_tag="TSUD_153330"
/note="Tsud_chr3.g38130.1.au"
/product="hypothetical protein"
/protein_id="GAU29583.1"
/transl_table=1
/translation="MCDPCCCCSCALSCAREHLLPLARKHLFPLALDHLLPILKEAVN
MIMGVPNDVIKHMKNELETIEELIHQADKMADAEEAKPNDGTRQKIKQLIEAFFRIQD
LIDEYIIREEQQLPDPGCAAGASDYVKTKLLRLQIAHDIQIIKSQINERKDTSTETDH
GFQIKSSTEQGSSSTAINPNATLLQNHRKAPFYMEEADVVGFEEPRNILIDWLVKGKD
KLTVVSVVAMGGQGKTTLARNVFDSKEVMGHFSYRVWITVSQSYKIEELLRGMLKELC
EQQNDSLPQKIHEMNKDSLVDEVRKYLQEKRYVVVFDDVWNSPFWADIKFAMIDKQKG
SRILITTRNMDVATSCSDSAIVKIHELKGLDDEQSLKLFNKKAFHDSDEVCPEKLIDI
SSKIVKKCGGLPLAIIVIAGQLSCKNRNRIEWYKFNENIKPKLKKDFVINTFLIPSYH
DLSYNLKACLLYFGIYPEDYEVDSKRLIRQWIAEGFIKEEEEMTLEEVAEGYLTELIH
RSLVQVVSINIGGRAKSCRVHDLVHDMILKKCEDLSFCKNISEDGQSALNGIVRHLSI
ATNSDNLMESIESSQVRSLLVPKPYTLHESVVRQITTKYRLLKVFDARIARETKIPED
LGSLSHLKYFSIKGVKYKYWRHIIVIHENGRQIASALPKSIGMLENLETLDLTDKRVF
DVPKEICKLRKLRHFLGYKLNLVELKDGIGGMTSLQTLWQVCLNENDENIELIKELGK
LKQLKKLGLRGVMGRHMSVLSSSINEMQQMEKLYIQSYHKNTHILSYQRKDIINLDLN
LPKLQSLVLEGNLVKLPEWIPKHQNLVQLELGYSYLTEDPMKLLKSMPNLMSITLSQG
AYKGEILHFQNGWFKNLKELHLFELYHLKSIFIDQGALPSLERISIYGASRLHRLPTD
IQHLENLKYLDFEAMSKELIENILLNGGKDHRIFKQVPSVRIVDLNGKSI"
assembly_gap 420898..422487
/estimated_length=1590
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
CONTIG join(BCLP01010230.1:1..25196,gap(497),BCLP01010231.1:1..16468,gap
(20),BCLP01010232.1:1..9256,gap(826),BCLP01010233.1:1..840,gap(933)
,BCLP01010234.1:1..1477,gap(186),BCLP01010235.1:1..2949,gap(1612),
BCLP01010236.1:1..41176,gap(399),BCLP01010237.1:1..2115,gap(1871),
BCLP01010238.1:1..790,gap(1624),BCLP01010239.1:1..10328,gap(189),
BCLP01010240.1:1..9433,gap(204),BCLP01010241.1:1..3336,gap(968),
BCLP01010242.1:1..1118,gap(142),BCLP01010243.1:1..2982,gap(712),
BCLP01010244.1:1..893,gap(938),BCLP01010245.1:1..2222,gap(623),
BCLP01010246.1:1..19484,gap(1270),BCLP01010247.1:1..8407,gap(183),
BCLP01010248.1:1..21527,gap(405),BCLP01010249.1:1..14722,gap(771),
BCLP01010250.1:1..28697,gap(82),BCLP01010251.1:1..12291,gap(2689),
BCLP01010252.1:1..1897,gap(2026),BCLP01010253.1:1..7780,gap(71),
BCLP01010254.1:1..58118,gap(3551),BCLP01010255.1:1..6225,gap(262),
BCLP01010256.1:1..4357,gap(11),BCLP01010257.1:1..1654,gap(1163),
BCLP01010258.1:1..9037,gap(153),BCLP01010259.1:1..5353,gap(385),
BCLP01010260.1:1..6272,gap(3016),BCLP01010261.1:1..32216,gap(7335),
BCLP01010262.1:1..269,gap(782),BCLP01010263.1:1..16113,gap(1590),
BCLP01010264.1:1..2988)
//