LOCUS CK335126 608 bp mRNA linear EST 12-MAY-2010
DEFINITION H3144F01-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3144F01 5', mRNA sequence.
ACCESSION CK335126
VERSION CK335126.1
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 608)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT Contact: Dawood B. Dudekula
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
Plate: H3144 row: F column: 01
Seq primer: M13 Reverse
POLYA=No.
FEATURES Location/Qualifiers
source 1..608
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3144F01-5"
/db_xref="taxon:10090"
/clone="H3144F01"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 201 a 110 c 132 g 165 t
ORIGIN
1 ggggtttata gcacaatagc taacaatcct aacaacagct ttgttgaaat tagaataaaa
61 gctcgtccaa gggaaatttg ctgaatgaag ttacccatca aacttaaagg ggctagaaag
121 ataacgttta catttaattg ctattcttca gttcttcatt aagtttccaa gttttagagt
181 ttaaggtatg gtgtgaagac tatatcctca gagtagtaga tttgccattc agtaagttct
241 gagacattat gaggtgccca cagtatgcaa aattggagag atactcaggt ggtcctcagt
301 agatcgatca tatgtggatc ttgtgcatgg aacctatcac cacccaaggt gagggcctaa
361 cacaactgag tcagcagttt acaaggaacc tagcaagaca gaacaattgt gcacctgtta
421 aaatgcctaa tcaatgctgt ataaaatatg acaggcactt aagcttaaaa ccaaaactgt
481 gcaagagctg cacttacatt tttgaagggg gttattagaa agtggcagag gtcattttgt
541 gctcacagat aaacactagg gaaaccagga atgttaccca gtattgtccc ctcaatggga
601 gacaagtg
//