LOCUS CK335012 503 bp mRNA linear EST 12-MAY-2010
DEFINITION H3132E09-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3132E09 5', mRNA sequence.
ACCESSION CK335012
VERSION CK335012.1
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 503)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT Contact: Dawood B. Dudekula
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
Plate: H3132 row: E column: 09
Seq primer: M13 Reverse
POLYA=No.
FEATURES Location/Qualifiers
source 1..503
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3132E09-5"
/db_xref="taxon:10090"
/clone="H3132E09"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 144 a 135 c 155 g 69 t
ORIGIN
1 ggacccgaca gcttcacaaa agacagcttc agaactgcac aaagtaaaaa gaagcggcgg
61 gtcaccaggt acgatgcaca gctgatcctg gagaacagct ctggaatccc caagctgacg
121 cttcgcaggc ggcacgacag cagcagcaag acaaacgacc atgagagtga cggcgtgaac
181 tcctccaaga tcagcatcaa actcagcaag gaccacgaca gtgacagcaa cctctatgtt
241 gccaagctca gtaacggggt cagcgcaggg ccgggcagca gctccaccaa gctcaagatc
301 cagctcaagc gggatgagga gagcaggggg ccatgtgcag agggcctgca cgagaacggg
361 gtgtgctgca gcgaccccct ctccctgctc gagtcccaga tggaggtgga cgactacagt
421 caatatgagg aggacagcac agatgaatcc tcatcttctg agggggagga ggaggaggag
481 gactgcgagg atgacttcga tga
//