LOCUS CK334463 585 bp mRNA linear EST 12-MAY-2010
DEFINITION H3032E12-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3032E12 5', mRNA sequence.
ACCESSION CK334463
VERSION CK334463.1
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 585)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT Contact: Dawood B. Dudekula
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
Plate: H3032 row: E column: 12
Seq primer: M13 Reverse
POLYA=No.
FEATURES Location/Qualifiers
source 1..585
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3032E12-5"
/db_xref="taxon:10090"
/clone="H3032E12"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 185 a 131 c 154 g 115 t
ORIGIN
1 ggaaccatgg aggctgttcc agagaagaaa aagaaggttg ccactgtgcc aggaaccctt
61 aagaaaaagg ttcctgctgg gccaaaaact ctcaagaaaa aggttcccgc tgtgccagaa
121 accctcaaga aaaagcgaag gaatttcgca gagttgaagg tgaagcgcct gaggaagaag
181 tttgccctga agacacttcg aaaggcaagg aggaagctca tctatgagaa ggcaaagcac
241 tatcacaagg agtacaggca gatgtaccgc actgagattc ggatggccag gatggcaagg
301 aaagctggca acttctatgt gcccgcagaa ccaaagctgg cctttgtcat cagaattcga
361 ggtatcaatg gagtaagccc aaaggttcgt aaggttctgc agctccttcg tcttcgacag
421 atcttcaatg gcacctttgt taagctcaac aaggcttcaa ttaacatgct gcggattgtg
481 gagccataca ttgcatgggg gtaccccaac ctgaagtcag taaacgagct catctacaag
541 cgaggctacg gcaaaatcaa caagaagcgg attgccttga cagat
//