LOCUS BT008481 1176 bp mRNA linear PLN 15-MAY-2003
DEFINITION Arabidopsis thaliana At1g47710 gene, complete cds.
ACCESSION BT008481
VERSION BT008481.1
KEYWORDS FLI_CDNA.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 1176)
AUTHORS Cheuk,R., Chen,H., Kim,C.J., Shinn,P., Bowser,L., Carninci,P.,
Dale,J.M., Hayashizaki,Y., Hsuan,V.W., Ishida,J., Jones,T.,
Kamiya,A., Karlin-Neumann,G., Kawai,J., Lam,B., Lin,J., Miranda,M.,
Narusaka,M., Nguyen,M., Onodera,C.S., Palm,C.J., Quach,H.L.,
Sakurai,T., Satou,M., Seki,M., Southwick,A., Toriumi,M., Wong,C.,
Wu,H.C., Yamada,K., Yu,G., Yuan,S., Shinozaki,K., Davis,R.W.,
Theologis,A. and Ecker,J.R.
TITLE Arabidopsis ORF clones
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1176)
AUTHORS Cheuk,R., Chen,H., Kim,C.J., Shinn,P., Bowser,L., Carninci,P.,
Dale,J.M., Hayashizaki,Y., Hsuan,V.W., Ishida,J., Jones,T.,
Kamiya,A., Karlin-Neumann,G., Kawai,J., Lam,B., Lin,J., Miranda,M.,
Narusaka,M., Nguyen,M., Onodera,C.S., Palm,C.J., Quach,H.L.,
Sakurai,T., Satou,M., Seki,M., Southwick,A., Toriumi,M., Wong,C.,
Wu,H.C., Yamada,K., Yu,G., Yuan,S., Shinozaki,K., Davis,R.W.,
Theologis,A. and Ecker,J.R.
TITLE Direct Submission
JOURNAL Submitted (15-MAY-2003) Salk Institute Genomic Analysis Laboratory
(SIGnAL), Plant Biology Laboratory, The Salk Institute for
Biological Studies, 10010 N. Torrey Pines Road, La Jolla, CA 92037,
USA
COMMENT RIKEN Genomic Sciences Center (GSC) members carried out the
collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
Arabidopsis Full-Length cDNA') : Seki,M., Narusaka,M., Ishida,J.,
Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J.,
Hayashizaki,Y. and Shinozaki,K.
The Salk, Stanford, PGEC (SSP) Consortium members constructed and
sequenced the pUNI (ORF) clones using the RAFL cDNAs: Cheuk,R.,
Chen,H., Kim,C.J., Shinn,P., Bowser,L., Chan, M.M., Chang,C.M.,
Dale,J.M., Hsuan,V.W., Jones,T., Karlin-Neumann,G., Lam,B.,
Lee,J.M., Lin,J., Miranda,M., Nguyen,M., Onodera, C.S., Palm,C.J.,
Quach,H.L., Southwick,A., Tang,C.C., Toriumi,M., Wong,C., Wu,H.C.,
Yamada,K., Yu,G., Yuan,S., Davis,R.W., Theologis,A., and
Ecker,J.R.
Cheuk,R. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to
this work. Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
contributed equally to this work as PIs.
FEATURES Location/Qualifiers
source 1..1176
/organism="Arabidopsis thaliana"
/mol_type="mRNA"
/db_xref="taxon:3702"
/chromosome="1"
/clone="U24647"
/ecotype="Columbia"
/note="This clone is in pUNI 51"
CDS 1..1176
/note="serpin protein"
/codon_start=1
/product="At1g47710"
/protein_id="AAP37840.1"
/translation="MDVRESISLQNQVSMNLAKHVITTVSQNSNVIFSPASINVVLSI
IAAGSAGATKDQILSFLKFSSTDQLNSFSSEIVSAVLADGSANGGPKLSVANGAWIDK
SLSFKPSFKQLLEDSYKAASNQADFQSKAVEVIAEVNSWAEKETNGLITEVLPEGSAD
SMTKLIFANALYFKGTWNEKFDESLTQEGEFHLLDGNKVTAPFMTSKKKQYVSAYDGF
KVLGLPYLQGQDKRQFSMYFYLPDANNGLSDLLDKIVSTPGFLDNHIPRRQVKVREFK
IPKFKFSFGFDASNVLKGLGLTSPFSGEEGLTEMVESPEMGKNLCVSNIFHKACIEVN
EEGTEAAAASAGVIKLRGLLMEEDEIDFVADHPFLLVVTENITGVVLFIGQVVDPLH"
BASE COUNT 337 a 258 c 255 g 326 t
ORIGIN
1 atggacgtgc gtgaatcaat ctcactgcaa aaccaagtct ccatgaatct cgcaaaacac
61 gtaatcacca ccgtctctca aaactccaac gtcatcttct caccggcttc aatcaacgtc
121 gtactcagta taatcgccgc tggatccgcc ggcgctacca aagatcagat cctctcgttt
181 ctcaaattct cttccactga tcaacttaat tcattctctt ccgaaatcgt ctccgctgtt
241 ctcgctgacg gtagtgctaa cggtggtcct aagctctcgg tggctaatgg cgcctggatc
301 gataagtctc tctcctttaa accttccttt aaacagctct tggaagattc gtataaagct
361 gcttcgaatc aagctgattt tcaatcgaag gctgtggagg tgattgctga agtgaattca
421 tgggctgaaa aggagacaaa tggtctcatc actgaggttc ttccagaagg atcagctgat
481 agtatgacca aactgatatt tgcaaatgca ttgtacttca agggaacatg gaacgagaaa
541 ttcgatgagt cgttaacaca agaaggcgag tttcaccttc ttgacggtaa caaagtgact
601 gcaccattca tgaccagcaa gaagaaacaa tacgtaagtg cttacgatgg tttcaaagtt
661 ttgggacttc cttacttaca aggacaggat aagcgacaat tctccatgta cttttatctt
721 cccgatgcaa acaacggact gtctgatctt ctggacaaaa tagtttccac tcctgggttc
781 ttagacaacc acatcccacg cagacaagtt aaagtccgcg aattcaagat tccaaagttt
841 aaattctctt tcgggttcga tgcttcaaat gttttaaaag gattgggact gacttcgcct
901 ttcagcggtg aagaaggttt aactgagatg gttgaatctc ctgagatggg gaagaatcta
961 tgcgtatcga acattttcca taaagcgtgt atcgaagtga atgaagaagg aacagaagct
1021 gcagctgcat cagctggagt tataaagcta agaggattgc ttatggagga agatgaaata
1081 gattttgttg cagaccatcc gtttctattg gtggtcacag agaacataac aggagtggtt
1141 ctgttcattg gccaagttgt tgatccgttg cattaa
//