LOCUS BG083664 744 bp mRNA linear EST 26-JAN-2001
DEFINITION H3090G03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3090G03 5', mRNA sequence.
ACCESSION BG083664
VERSION BG083664.1
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 744)
AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A.,
Tanaka,T.S., Carter,M.G. and Ko,M.S.H.
TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set
JOURNAL Unpublished
COMMENT Other_ESTs: H3090G03-3
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3090 row: G column: 03
Seq primer: -21M13 Reverse
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..744
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3090G03-5"
/db_xref="taxon:10090"
/clone="H3090G03"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 212 a 150 c 128 g 254 t
ORIGIN
1 tttttttttt ttttttttta taaaaacaag atttgtattt tatttccttg taaaaatctt
61 tgcccatgca gacaaaccag tgttaggaaa gtattcacca tcatttaaac aaataaccac
121 ttaaatacaa caagtctgca agtttcatct gtataaaaat aagatacatt tttacagaat
181 ttatgctcca gttcttatag caataaacaa tacacaacta taataaagta caattgaacc
241 tgaccatggc tttcaattag atactgctag ggcattttaa tgtgcaaaaa accttaacat
301 agttcttttc caaagaaaat gtcctcagtg tttctagaaa cctagacaat tttaataaat
361 catttcctaa tcagtttttt ttttttatgt ttcgattgag tccacacatc attacactgc
421 atatgggcaa caccaggaac cgctgcagtg tcagaggatg aaagtcagcg cctatgcctg
481 ccatgtcctg agcgactgcc accatggtgc ttgcctttat gggacctctc aaaggagcga
541 gatcgttcac gcctgtctct gtgatgtccc ctttcgtgcc tgtgtttctt ggtaacatct
601 gagtgatccc gagtcttgct ctgagatcga gaccgagact ttttcctctt atgaccgtgt
661 ctatttgagc tttttaaatc ttctctggta tgtttggcct taaggtgagg agaaccatga
721 ttatgatgtc ttcgggatag tcga
//