LOCUS BG080123 700 bp mRNA linear EST 12-MAY-2010
DEFINITION H3050A04-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3050A04 5', mRNA sequence.
ACCESSION BG080123
VERSION BG080123.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 700)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG080123.1.
Other_ESTs: H3050A04-3
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3050 row: A column: 04
Seq primer: -21M13 Reverse
POLYA=No.
FEATURES Location/Qualifiers
source 1..700
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3050A04-5"
/db_xref="taxon:10090"
/clone="H3050A04"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 179 a 147 c 144 g 230 t
ORIGIN
1 ggaagagcag acccagactc actctggagt cagcttatcc gttgctccaa tcctcccttt
61 tagtttcctg agcctggctt ggaccttggc attccgtttg aattccttct tctaactgga
121 acatttgtgt tgtatctgta acactggcac tgaaataaag accacacggt taaagaaatc
181 gttcccacat tgtactttat ggtgttgaaa tgaagctttg tagcttcctt gccccctatg
241 tgagagcaag tcttacggtc accatagggt aggaatgtcc tttcctgagt atgagaaatt
301 ggtctcttaa gaaaccaatc tcatgaacat tcgaattaaa ggtttgagct ttttaaacag
361 taagagtgcc gagtgttttt tagaaaagac cccaatatta ccaaatcttt atgttgaatt
421 gttggaatga ggtgaaggtg attgtctgtg gtacacgttg aatgtactat gtatgttcag
481 gtattcaggc atcatgtcca gtttactgca ggagaaagta aaagtgggcc cccttgcttg
541 taaagcgttt gcagttgtta ctgtattatg cagtaagacg acactttggc ttcagtttta
601 actcttgata caaatctccc tttctccctg ctccatttca ccacgccttt acttaaattc
661 ttcagtgtct tgtcaaacct agctctgtat cagatgctag
//