LOCUS BG079775 584 bp mRNA linear EST 12-MAY-2010
DEFINITION H3044H10-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3044H10 5', mRNA sequence.
ACCESSION BG079775
VERSION BG079775.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 584)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG079775.1.
Other_ESTs: H3044H10-3
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3044 row: H column: 10
Seq primer: -21M13 Reverse
POLYA=No.
FEATURES Location/Qualifiers
source 1..584
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3044H10-5"
/db_xref="taxon:10090"
/clone="H3044H10"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 134 a 161 c 118 g 171 t
ORIGIN
1 atcccttgcg atgccatgaa gctccttaca aggaatgctg ctctgtggtc cagacctctc
61 cctctcccta cctccaagga cttctgtgca gaagaattgg tctttgctgt gggctttcat
121 ggggactgtc aaaaccctat cagcacactg gcaggagata ggagaatgtg tcctccactg
181 aaagctacag tcccttttgg acatcctgtc catgcaaccg tctctgcctg tcccagcgat
241 cacataattc ctattctcgt cccgctgcct cctgctgtac ccaggcttgg aacatggtct
301 gggcgatttc atttctcctg cctgcatctt cccaggtcat ctgtttcact aatgagatct
361 cactgagcat gctcgaactt ctccctctgg gacctctcaa cactcctggt atagattagc
421 tcattttctg ccatacagag ttgaaacaat ttcaagaggc atatttatgt ttatatgttt
481 ccaggaagca cctgttaatc aatgtggaaa ggtattgaga accgtaaccc ctggatcctc
541 caaatctttg agctattgat acgtgaaagc tcaatagcca tttg
//