LOCUS BG079269 603 bp mRNA linear EST 12-MAY-2010
DEFINITION H3037G10-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3037G10 5', mRNA sequence.
ACCESSION BG079269
VERSION BG079269.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 603)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG079269.1.
Other_ESTs: H3037G10-3
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3037 row: G column: 10
Seq primer: -21M13 Reverse
POLYA=No.
FEATURES Location/Qualifiers
source 1..603
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3037G10-5"
/db_xref="taxon:10090"
/clone="H3037G10"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 157 a 149 c 125 g 172 t
ORIGIN
1 cagttacagg ggatctaaag ccctcctctg acctcccaga gcaccagcca cacatatgag
61 ctacatgaag gcaaaacact catacacaag aataaaataa tgccatttca ttttgttttt
121 ctgttttgtt tttttgtttt ttgagacacg gtttctctgt agttctagct atcctggaac
181 atactctgta gaccaggcca gcctcgaact gacagatatc cacctgcctt tgcctcctga
241 gtgttgggat aaaaggcacg ttgccaccaa ggcctggcta aacaaatctt acaaaatata
301 aaaaagaaca attctccttt tccccagcga ctataaactg ctaataaata gttccatggt
361 tagaggcagg acctcaactc ctcccctata cattcttgag atttgactgg cttggtcttg
421 ggtaggtaac catagctgct gtgagttgat gactgcagtc cccactttct gttcatcaca
481 tgtgtgcctt gtgcccaagg tcagaaaaga gcctctgatt cccggaacct gagttatgga
541 ggctgttagc agtaggggct gttgactgaa tctgggtcct ctgcaacagc agccagtgct
601 ctt
//