LOCUS BG076765 583 bp mRNA linear EST 12-MAY-2010
DEFINITION H3005F02-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3005F02 5', mRNA sequence.
ACCESSION BG076765
VERSION BG076765.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 583)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG076765.1.
Other_ESTs: H3005F02-3
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3005 row: F column: 02
Seq primer: -21M13 Reverse
POLYA=No.
FEATURES Location/Qualifiers
source 1..583
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3005F02-5"
/db_xref="taxon:10090"
/clone="H3005F02"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 191 a 108 c 163 g 121 t
ORIGIN
1 ggaacacctc acgaaggggc aaaagtggat tcaattcgaa gagtggacaa aggggatctt
61 cttccaagtc tggaaaattg aaaggtgatg accttcaggc cattaaaaag gagctgactc
121 agataaaaca aaaagtggat tctcttctgg aaagcctgga aaaaattgaa aaagaacaaa
181 gcaagcaagc agacttgtcc ttctcatccc cagtagagat gaagaatgaa aagtctgaag
241 aagagcagag cagcgcctct gtgaagaaag atgagactaa tgtgaagatg gagtctgagg
301 caggtgcaga tgactctgct gaggagggtg acctgctgga tgatgacgat aatgaagatc
361 ggggggatga ccagctggag ttgaaggatg atgaaaaaga gcctgaggaa ggagaagacg
421 acagagacag cgccaatggg gaggatgact cttaagcaca tagtggagct tagaaatctt
481 atcccattat tcatttacct aggcgtttgt gggagatgaa agtaacacca ggtcatctcc
541 cctggggtct tctgcacatt ctcactgttg tcccgcctta ccc
//