LOCUS BG075154 718 bp mRNA linear EST 12-MAY-2010 DEFINITION H3143H07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3143H07 3', mRNA sequence. ACCESSION BG075154 VERSION BG075154.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 718) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG075154.1. Other_ESTs: H3143H07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3143 row: H column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..718 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3143H07-3" /db_xref="taxon:10090" /clone="H3143H07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 170 a 161 c 135 g 252 t ORIGIN 1 gatttgtaca tctatattca gctagggctt cacagcagca atggacagca atagtgtact 61 caatatagac acttttcaaa actactccaa aaaacaaatg acaaaagtag ttaagaacaa 121 ctgaacatat gttgtgtgta ccgggcataa aggatgaatg ggccctttag ttaacccact 181 gcttggataa catgacactt agtccacttc catctctccg gagtcggtgt gctgtgagct 241 tcctttgggt ggatctgggc tggtctctga accactctgt ccgtccattg gtccattgtg 301 ctcactacca gtttttgctt tgtcttcagg agcttctact tttggtttgg gcttataaac 361 gatggggtta cagaaattat ccagttcctt tgactttgta actatttctg acacttttac 421 cacgggatct tgagtgagac ttaatttatt ctgtgcattc atcttactgt ttagccagtt 481 catggagtca ctgatgtact tttcaactct ttccatttca gcaggatcca gatgatcata 541 tctttcatcc ttgtttctgt gtgcttctat cactttcagg acaagctgaa tctttttccc 601 caagtcattt aaagcttttg gtctctcttc atgctccacg tacttcattt gaatgggctg 661 gccatatttc tttaattcct gcagcctatc cacataaact tgtttaggct ggtcttct //