LOCUS BG074637 634 bp mRNA linear EST 26-JAN-2001
DEFINITION H3137E04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3137E04 3', mRNA sequence.
ACCESSION BG074637
VERSION BG074637.1
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 634)
AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A.,
Tanaka,T.S., Carter,M.G. and Ko,M.S.H.
TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set
JOURNAL Unpublished
COMMENT Other_ESTs: H3137E04-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3137 row: E column: 04
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..634
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3137E04-3"
/db_xref="taxon:10090"
/clone="H3137E04"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 214 a 127 c 128 g 165 t
ORIGIN
1 caaatcttag ttcttatact gcaagctgat taaactcata caacactatt ttaacgaaag
61 acatttttag tcaacaagtt gaactaagtc ctactacttc agtcaggtag atgtgtaggt
121 tgaagtagtg agggaatgcc aatctttgta cttagggaaa ggatacttca cacaaatcca
181 tgtataccag accagcagtc gctagaggtt aagaagggct tgagggtggg ggatgggtaa
241 caagggacag ttacagaaca ggtgtaggtt ctgagcattc tagagcacac actgtacgac
301 aaacaccata gcctaataac tgactatgca tcttaattta cggaggaatt aagagagctg
361 cgtttgtagc ttcccaacaa caaaaccgac ccctgacagg aattatgcgg gtctgctaat
421 cacatactgc acacatgcag tagttcatca atgtacacga taaaggttta taattatgtc
481 ccaattaaca acagtaaaaa tcaaattgag aatctgaatt taaaattcaa gactagtact
541 acatccataa acctattaga ctagataact gaagcccggc cccttccgtc tactgtagtg
601 actcatgcag tttgtacagt atacagagac gctg
//