LOCUS BG074320 681 bp mRNA linear EST 12-MAY-2010
DEFINITION H3133F07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3133F07 3', mRNA sequence.
ACCESSION BG074320
VERSION BG074320.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 681)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG074320.1.
Other_ESTs: H3133F07-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3133 row: F column: 07
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..681
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3133F07-3"
/db_xref="taxon:10090"
/clone="H3133F07"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 265 a 123 c 110 g 183 t
ORIGIN
1 aagaagtgga tatatacata tatttatcaa atataacaag gtcatacaaa agcataacat
61 aattcacacg tacggaaggc tactgtgtgt gctgtccctt ttacatccca ttcagacaaa
121 caatgatgca gagaggaaca ggagtgcaca agttctgaaa actaggttgt tagtttgctc
181 tttaaacaaa actgatctgc tcatctacgc cttctcacat ttctaaacac gacgtgtacc
241 cttaggatta acttaaataa atcttcactc catttgaaag aactacacat tttcaatggt
301 tgaaagccag gtagaaaaag aatataaaat gatctgtaag tcaaaacatt tcttataaaa
361 gaacagttta aacaaaccca ggtagtaaaa agaggaaatg tatcaaattt aaaaacttct
421 gaaaaacagc atctttcctg gaccactgta taaatgtgtt cagaactgtt ggaaatgaga
481 gtttatacac acgaggctaa gggataaaac aaaaacaaaa caaaccccct agcccctacc
541 aaatgtatta aatccatcta aagtcaaata agaggtaact gaactacaca gttcaggttt
601 aagtgcattt tggggggtac aatttaactg ccatatgtaa aaattggcaa ttataattaa
661 atacagactg gtaaaccctt t
//