LOCUS BG074102 687 bp mRNA linear EST 12-MAY-2010
DEFINITION H3130H05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3130H05 3', mRNA sequence.
ACCESSION BG074102
VERSION BG074102.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 687)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG074102.1.
Other_ESTs: H3130H05-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3130 row: H column: 05
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..687
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3130H05-3"
/db_xref="taxon:10090"
/clone="H3130H05"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 185 a 155 c 168 g 179 t
ORIGIN
1 gtgggttggg tttttttttt cttttttggt aattttcttt tattaaaaac atttcctaaa
61 aaaaaatggt cttttccttt atgtctgggt gaaatatctg actacaggct ggcctcaagc
121 attgggaagt agatgaaggc agcaggtctc cccaggttat catttctgcc ctgagatcta
181 aagagacatt tcctcaatgc aaatcagttg attcttcagc tcttagctcc ctccaggtcc
241 taggcccaaa cttggaaact ccaaagtcta gatgttaaac tacaattcct tgaaccctgg
301 ggtcaggggg ataagtgttc ccaaaaatca acaaggattt atggatggat ggtagcctct
361 ctcccacagt gtcctgtttc ttgaatgtag gcagatggga aaataagtgt gggggctgga
421 gacaggagct caggtagacg atgccatcca tgaacccaca ctcctttata ttctttcacc
481 tccactcctg cccactatcc accccaaagg tctagaatgc ctgcagcagg gcagaggtgt
541 caagaggtgg aaacagcagc ctagacccca gcagaaaccc tgggaaacaa gtgtaaagag
601 atacaaggcc tcatctcatc ctggggcaca gggtgtatgt aggaagggag ctggaggtga
661 gggccaagac actctccagg agtgggc
//