LOCUS BG072620 571 bp mRNA linear EST 12-MAY-2010
DEFINITION H3113A04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3113A04 3', mRNA sequence.
ACCESSION BG072620
VERSION BG072620.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 571)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG072620.1.
Other_ESTs: H3113A04-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3113 row: A column: 04
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..571
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3113A04-3"
/db_xref="taxon:10090"
/clone="H3113A04"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 124 a 145 c 122 g 180 t
ORIGIN
1 aaagattcaa ggtcattatt tatttgttgc tcttaaagac tcatttttga ctggactcag
61 acttagaagt agaagctctc agtgaggaca gcctacgtct cttggcaatc tgttcctggc
121 gcttttcttt ggcttccttc attctcttgg ccaaaagttt agcgtattct gcagcctcct
181 ccttgttctt cttagtgcgt cgcttcttca gagcaatacg tcggcgtttg tgttgcagga
241 cacgaggagt aacaagtcgc tgaatcttgg gtgctttggt cctgggcttc ttaccttctt
301 tgtttaaggg cttcctgaca acatactggc ggacatcatc ttctttggag agattaaaaa
361 gcttgcggat tctactagcc cttttaggtc ccaaccgacg aggcacagta gtgtctgtca
421 gtccaggaat atccttctct cctttcttta caatgaccaa gttgagaaca ctgagattag
481 cgtccacaat gcatccacga acagacttgc gcttcccctc tccagttctc cttggcctgt
541 aacaggaatg ccccttactc aacagcaggc g
//