LOCUS BG072203 601 bp mRNA linear EST 12-MAY-2010
DEFINITION H3107H10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3107H10 3', mRNA sequence.
ACCESSION BG072203
VERSION BG072203.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 601)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG072203.1.
Other_ESTs: H3107H10-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3107 row: H column: 10
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..601
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3107H10-3"
/db_xref="taxon:10090"
/clone="H3107H10"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 147 a 149 c 129 g 176 t
ORIGIN
1 cagatgttca gagtcttctt tactgcaaat atgatgtctt tgacctgagg tacggagttg
61 tcttctagga cctttgcgta aggcataggg acatcagcac cagtgacacg cacggcaggg
121 gcatcaagga agttgaatgc agggccttcc ataattctgg cacaaatctc agctcctact
181 ccaaattgtg gccagcctcc ttccacagtc acgagatgat ttgtcttcat cacactggct
241 tctatggctt cgatgtccat tggtctgatg gtgcgcagat ttattacctc acattcaatt
301 ccctccttag acaatacagc tgcagcttct aggcagtggc ccactggtct tgaatgggca
361 actacagtga tgtgggtccc ttgcctttca attttggctt ttccaatagg aatcaggaaa
421 tcttttgact gagcttctgc aggaagttca aatgcaactc catacatcag ttcattttct
481 agcattacca ctgggttatt atcacgaatg gccgatttaa taagtccttt tgcatcctcg
541 gaattccagg gactgaccac ttttaaacct gggcagtgcc cataccatgc agcaaagcat
601 t
//