LOCUS BG072003 537 bp mRNA linear EST 26-JAN-2001
DEFINITION H3105F02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3105F02 3', mRNA sequence.
ACCESSION BG072003
VERSION BG072003.1
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 537)
AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A.,
Tanaka,T.S., Carter,M.G. and Ko,M.S.H.
TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set
JOURNAL Unpublished
COMMENT Other_ESTs: H3105F02-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3105 row: F column: 02
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..537
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3105F02-3"
/db_xref="taxon:10090"
/clone="H3105F02"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 116 a 94 c 125 g 201 t
ORIGIN
1 ggaagctgtc ttatgtgagg atgttttgct aaagcagaca cgtaaaaaga cgttttgctg
61 agaacagaca catggtgctt ttctgggcgc tgtgtgagag tgcacataat gttatgccag
121 agtggacgtg taatgttgag aaagaattta aattgaaccc cacagatagt aagaggatat
181 gcttgcatta actaaccttg caacactttg gggntcttct ctgatgatgt tcttgcattg
241 gtacaccttg caacacttaa ctgttttttt tttggttttg gttttggttt gttttttgtt
301 ttttgtttgt ttgtttgttt gtttgtttgt ttgtttgttt tggctgatct tcgcttgcca
361 tgacttcata gtgagaaagc agcaaagacc ttcttgaggt attctggctg cttctggctg
421 cttctgcaag gctccactgc tcttcaatac aggatttctc tgagtagttc taggattcac
481 tctgtatatt tggctgtcct caaactcaga gatccaccta cttctgcgga tagtcga
//