LOCUS BG071670 662 bp mRNA linear EST 12-MAY-2010 DEFINITION H3101H01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3101H01 3', mRNA sequence. ACCESSION BG071670 VERSION BG071670.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 662) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071670.1. Other_ESTs: H3101H01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3101 row: H column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..662 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3101H01-3" /db_xref="taxon:10090" /clone="H3101H01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 213 a 136 c 147 g 166 t ORIGIN 1 gacaaatttt caatcttttt attcaaagca gcttctcaca atgtataaat actgcatatt 61 agcacacatg aaaaatacaa cttctaaggc acccagaaat atgttcatat acgttacagg 121 accattcaca aagagcggac gatttgctcc agacagtcag catttgataa atcaggagat 181 tattaccctc agtactgcac ccagtttggg gaaaatattt acagcgtgga gaatggacca 241 gctaaacctg catataaccc tatgaaggac tcatacttac aaggatccgg aactaaagac 301 cttcccgtga aaatctggca agaaaaagaa aatgagcaac ctaacctgca aaggtatccg 361 tggattttgg tgtgtttgct acgtccgtga tccaacccag aaactcccag ggtgagctgg 421 atatgttttt ggtagcctgc ttcagtatcc gaagtttggt aataagcctt accagtagaa 481 taccacttct ttaacatcag tcttctggat tagttaagag gccaatgaca tcatcgtgaa 541 tggggatgaa aatggggcaa cccatggtgg gggcacgggg aacattcttg ctctactaag 601 caggaagtgg gatggcttga tgagaaacta aagagatgga catctggcag tcacacagga 661 tg //