LOCUS BG070808 821 bp mRNA linear EST 26-JAN-2001
DEFINITION H3092D04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3092D04 3', mRNA sequence.
ACCESSION BG070808
VERSION BG070808.1
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 821)
AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A.,
Tanaka,T.S., Carter,M.G. and Ko,M.S.H.
TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set
JOURNAL Unpublished
COMMENT Other_ESTs: H3092D04-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3092 row: D column: 04
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..821
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3092D04-3"
/db_xref="taxon:10090"
/clone="H3092D04"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 227 a 219 c 147 g 228 t
ORIGIN
1 ataaatttat tcgttacttt tttaggggag gaaagggttt attcggctta cacttccatg
61 ctgctgttca tcaccaaagg aagtcaggac tggaactcaa gcaggtcagg gagcaggagc
121 tgatgcagag gccatggagg gatgttcttt accggcttgc ctcacctggc ttgctcagcc
181 tgctttctta tagaaccaag actaccagcc ctgagatggt cccacccaca aggggccttt
241 cccccttgat cactaactga gaaaatgcct tacagttgaa tctcatggag gcatttcctc
301 aactgaagct cctttctctg tgataacccc agctgtgtca agttgacaca aaactagcca
361 gtacaattga ccccttgtca acttgacaca caaaaacatc actagtaagc ctcaaccctt
421 acaatcttat tcatccccat tctaaataac tttaaaagtc ccacagtctt aacatattct
481 taaaatttca atctctttaa aatatccatc tcttttaaaa ttcaaagtct ttttacaatt
541 aaaagtctct taactgtggg ctccactaaa acagttcctt ccttcaagag ggaaaatatc
601 agggcacagt cacaatcaaa agcaaaagtc aatctccaac cgtccaatgt ctgggatcca
661 actcacgatc ttctgggctc ctccaagggc ttgggtcact tctccagcca ggccctttgt
721 agcacacaca tcatcctcta ggctccagat gcctgtactc cactgctgct gctggtcttg
781 gtggtcatct catggtactg gaatctctaa aacactgcat g
//