LOCUS BG070574 647 bp mRNA linear EST 12-MAY-2010
DEFINITION H3088G11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3088G11 3', mRNA sequence.
ACCESSION BG070574
VERSION BG070574.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 647)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG070574.1.
Other_ESTs: H3088G11-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3088 row: G column: 11
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..647
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3088G11-3"
/db_xref="taxon:10090"
/clone="H3088G11"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 191 a 139 c 135 g 182 t
ORIGIN
1 ccagttatga agtagcaaca ataactttat gattgggagt caccacttcc tgagtaagtg
61 tcctaagggc cgcagcacta ggaaggctga ggactaatgc tctaggtgag gtttgagaac
121 agctagactt ttaacaggag aagaaacaaa gtgctagctc tgtacatgcg gctggagggc
181 ttgatctgaa aatgaagaaa aagatcaaac agcagtaaag actgtgtagg atgaagcata
241 ctgatgttag gataaacgta catccactga tgtttgaact tccccagaaa aggaaaccct
301 agcttagtct ccttaaacta cggttttcat catttagaaa gttatcattt agcactatgc
361 aacagcgtgt ccccagatgg acgacaacac attagttctt ctgattttgt aagttttttt
421 ctatttgttt tgttaatggg ttgggactag gtctcatgta gcccccagct acccatggag
481 ccaaagtcaa ctttcaactc cttggtcccc cacttctgca cttccttgtg tcaacccacc
541 tagctgcatt ctataaaatc ttcctcatgg atcactagtc ctgacatcat tgagcatgtt
601 gtactcaata gtctattaaa gcaagtaaaa gtccgggatc agctaac
//