LOCUS BG070143 698 bp mRNA linear EST 12-MAY-2010
DEFINITION H3084B08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3084B08 3', mRNA sequence.
ACCESSION BG070143
VERSION BG070143.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 698)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG070143.1.
Other_ESTs: H3084B08-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3084 row: B column: 08
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..698
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3084B08-3"
/db_xref="taxon:10090"
/clone="H3084B08"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 231 a 138 c 117 g 212 t
ORIGIN
1 gagacagggt cgcattctgt agctcaagct gtcctggaac tcactatgta gtctagcctg
61 gcaccaaatc catgccaatt ctgtctcacc tcccaaatac tgggattaca aatgtgggcc
121 acctcatcga gcttaaagaa aggtttcttt tagagggaag gtgcttaaaa acaagaatat
181 cttaattggc aatatttact cagcttagat tcaccatttc agataaccat gcccttactc
241 caatcctttg cttgcttact atatgagtaa agcctatcac tttatttata acatactttt
301 agctgtgaga tacatctagc atgctctagc aaaagaaatt taaataaaaa catttttaat
361 ttgtaaaaaa tatttcaaca taaatactaa tagctaacaa atgtttattt tctatcaaat
421 aaattattca aatgcataca cctaccattg gagaaatttt attataaata tgcaaaatga
481 ggattttctt tttcactgtt tcctggcccc tgaataaata aaatcaggat ctataagttg
541 tgctaagaat agtgggtatc tgaaaactag gaagaggtag tcagatctcc ataagttcat
601 cttcaaaaga agttccaggg gctggtgaga tggctcagtg ggtaagagca cccgactgct
661 cttccgaagt ccagagttca aatcccagca accacatt
//