LOCUS BG070132 617 bp mRNA linear EST 12-MAY-2010
DEFINITION H3084A07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3084A07 3', mRNA sequence.
ACCESSION BG070132
VERSION BG070132.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 617)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG070132.1.
Other_ESTs: H3084A07-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3084 row: A column: 07
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..617
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3084A07-3"
/db_xref="taxon:10090"
/clone="H3084A07"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 152 a 133 c 137 g 195 t
ORIGIN
1 agtctcttcc atttaattac acgtgctgta gatctgtctc aatctctttg actcagcttt
61 ggtttgatta gctggtcaag gcacatgctg ctgcataata ctgttcaaac aattagctca
121 ttaaaaagca gaactaaatc ccagtgtcta aagctgatct taggtatagc tacctgcctt
181 gtatcagatc ttgggtaact gcccgttggg gtggccaggg aattcttctg gttgcaaaac
241 atggagtctg caggtggggc atgtgccctg ttgcatcaac catggtctaa tgcactgaga
301 gtgaaatttg tgagcacaag gcaaaactga aaggttttct ggagacaaat tctcatgaca
361 gattacacaa ggctcctctt cttcctcttc attatccatg tctttgtctc cttcccatgt
421 ggcagaacct tgtgctgact tggggtcctg gggagcatta ggctgtgatg cagtgtggct
481 gggtgaagca ttattgccat cttgagcaga cttttcttca ctctcagatt tcttgggctc
541 aatcatttga gaaattttgt aaacaatttc atcaaatgtc agtcgagaca cggactttcc
601 atgagaatcc tttaact
//