LOCUS BG069986 610 bp mRNA linear EST 12-MAY-2010 DEFINITION H3083D02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3083D02 3', mRNA sequence. ACCESSION BG069986 VERSION BG069986.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 610) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069986.1. Other_ESTs: H3083D02-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3083 row: D column: 02 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..610 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3083D02-3" /db_xref="taxon:10090" /clone="H3083D02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 200 a 107 c 89 g 214 t ORIGIN 1 ctttgaaaaa gtggtggatc tctgtgtgtg tgtgtgtgta tacatactca gtgctaacag 61 ctctgggtat cttacaagct gaacttcttg atacactgtt tgtctttaac attatgcttt 121 gaataaactt tctggaaaac ttttctgttg cacaagcttc ccaactcatg taagacctta 181 tttgttaaag ttgataaata aaatgtctcc ataaactact gtaacatctg agagccgaat 241 gagttctgct acattgaaaa cagtttgtct acttttggtt atttatgaac aagtcagcag 301 tttggtttgg ttgcttagaa taatcaatca atgccagaat ttgaaggtct ttttccctga 361 aatattttag ttttataaaa tcttttccta ctccccactg tacaataaaa caaatcaagt 421 tagtttctaa acgacatcat tcatattttt atctcagatt aactttgact tgcaaagatt 481 tccaaatcag tttattctca atatcttgac agttggcagc accaatgtta accaattaaa 541 attatccaaa tagacacatg tacaaaagat atacaaatta aaaccatttt aaaagcaatg 601 gataccataa //