LOCUS BG069805 746 bp mRNA linear EST 12-MAY-2010
DEFINITION H3080C12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3080C12 3', mRNA sequence.
ACCESSION BG069805
VERSION BG069805.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 746)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG069805.1.
Other_ESTs: H3080C12-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3080 row: C column: 12
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..746
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3080C12-3"
/db_xref="taxon:10090"
/clone="H3080C12"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 208 a 169 c 161 g 208 t
ORIGIN
1 acaaaattat aaaatgcctg taataagaat aagtgcattt caaggaaagc acaaactcat
61 ttaatttata gagccagtta aagccttaaa aaatttaagt ggaaattgaa atatgcaaac
121 atgtataaac attctacaaa agatggtcat cttttcctga gtgtactaaa gctacagacg
181 ttgaggtgac gggcaggcag ggtggagccc tcaagggcat tttctttcta cacactgctt
241 ccctccttct tcatattcct gtttagaaat ccacatctgt tgaaaggtac ccaaagatgc
301 taggatagag ccaccaatcc atgagctgaa cctccgctcc accgtcgtgt tgtttgcaat
361 cagtttcaac cgcatacttg gtggagtttt ctgagaaagc tctctattta acctgtcagt
421 gaaactctgt attagcgtgt ttcctcctgc tacgatcaca ctgccgtaga gacctggtct
481 gatgtcgatg tcacacattc cgacgctggt tgtgataacg tgactgactc ccagcatcgt
541 gttcccagac agtcccttta cgttggaagg gtcaaataac ccttcaggaa ttttcagccg
601 ctctgcccca aaatcacagt tgtagccatt ggggaattcg tagtggacgg ttggcatctg
661 tgcagccact tgttcgtcgt aggtggagtc tgacacctga agaacggaag cttgaaaatc
721 ctggatgacg cagtgcacat gtaatt
//