LOCUS BG068039 562 bp mRNA linear EST 17-DEC-2003
DEFINITION H3061A12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3061A12 3', mRNA sequence.
ACCESSION BG068039
VERSION BG068039.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 562)
AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A.,
Tanaka,T.S., Carter,M.G. and Ko,M.S.H.
TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set
JOURNAL Unpublished
COMMENT On Jan 26, 2001 this sequence version replaced BG068039.1.
Other_ESTs: H3061A12-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3061 row: A column: 12
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..562
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3061A12-3"
/db_xref="taxon:10090"
/clone="H3061A12"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 179 a 114 c 101 g 168 t
ORIGIN
1 gagttgggaa gatccaactt taatctgggc cacaccttct gtggcagtct atataaagga
61 catggaagaa agacactttg ctctttgcct gtttgccctt gatcacaatt taccggcatt
121 agaacaaatt aaattacagg atttcaatgt atactgaaga ccaaacaaga gatccagcat
181 catgggctgg acaactattg gattttctgt agggagacag ccatcattgg actagctgga
241 ccacagcctg taaagaactc taataaatat cccatatata tgaatattcc catatatgtg
301 aatatatatc ctgtatacat gaatattcat atatgttcat tctatcagtt ttgttccttt
361 agataaccct gactaataca ctgatataac aaaagatatg gagaggtctg gagacctcca
421 tggttgaaag aactggctgt tcttccagaa gtcctgaatt caattcttag catcctcata
481 gtggctcatg acatctataa ctgtattcct atgggatcca atgccctctt ctgatatgca
541 aatgtatatg cagacaaaac ac
//