LOCUS BG067566 632 bp mRNA linear EST 26-JAN-2001
DEFINITION H3055G09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3055G09 3', mRNA sequence.
ACCESSION BG067566
VERSION BG067566.1
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 632)
AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A.,
Tanaka,T.S., Carter,M.G. and Ko,M.S.H.
TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set
JOURNAL Unpublished
COMMENT Other_ESTs: H3055G09-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3055 row: G column: 09
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..632
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3055G09-3"
/db_xref="taxon:10090"
/clone="H3055G09"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 221 a 130 c 118 g 163 t
ORIGIN
1 aagaattcca aaatgtttat ttctaaaaac aaaacgtgtt cgagtgcaac accagacaca
61 aaggaagaga aaggctggaa tgctgaagct ggagaaccca cctgcatggg ccatgtctgc
121 ggaacgaaca agcaccgtta acccaggaac cacggcgtta gctgcaatca cgcctaatat
181 agaaaacact ttagaaagat tatttaacta tggagtaaca aagttgttct ttttttcttt
241 ctacaaacct ctttaaaaat caattggaaa ttggcatttg aaattgatga aaatggttta
301 aaaatggacc cagttctaca gcttgtcaaa gggaacaggt cattatttat ttttggaggg
361 aaaacgagtg tctgaattga gctttggcct ccttccaacc accaagcagg tgcagtaaac
421 cgagtatttc tataggaatc caaacacatc taaaactggc ctcagaaaat atttccctag
481 actataaaaa tactaaatgg aatacaaaaa ttccagcata tgcagccaat agactacggc
541 agacaagtat ctaagacaca cttaaagcta ttttgtgcca cgatcctcac gagcatcaag
601 tactgtagta atttcctgcg tgctttctga cc
//